Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1401 |
Symbol | |
ID | 4450672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1545111 |
End bp | 1546697 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639693439 |
Product | phosphoesterase |
Protein accession | YP_835046 |
Protein GI | 116689423 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR03397] acid phosphatase, Burkholderia-type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAGC ACGCCTGGAT TCGCTACACG CCGATCGCCC TCGCGGCCGC GCTCAGCCTG ACCGCCTGCG GCGGCGACGA CGTCACGCAA CAGGGCCTGT CGGCCGTCAA GAACGTCGTC GTGATCTACG CGGAAAACCG CAGCTTCGAC AACCTGTACG GCAACTTCCC CGGCGCGAAC GGCCTGCAGA ACGCGACGGC CGCGAATTCG GTGCAGAAGG ATCGCGACGG CTCGACGATG GCGACGCTGC CGAAGATCTG GGGCGGCCTC ACCGCGACCG GCATCACGCC GGCGGTGACC GAGGCGATGA CGGCGAACCT GCCGAACGCG CCGTTCGCGA TCGACGATCC GAAAGGCTTC AACCAGTCGA TGAGCATCGC GACGCGCGAC ATCGTGCACC GCTTCTACCA GGACCAGATG CAGATCAACG GCGGCAAGAA CGACATGTAC GCCGCCTGGA CCGACGCGGG CGGCCTGACG ATGGGCCACT ACACGGCCGA TCCGTCGAAG CTGCCGCTGT GGAAGATCGC GCAGCAGTAC GTGCTCGCCG ACAACTTCTT CATGGGCGCG TTCGGCGGTT CGTTCCTGAA CCACCAGTAC CTGATCTGCG CGTGCGCGCC GTACTACGCG AATGCCGACA AGAGCCCGGC GGCCGGCAAG ATCGCCGTGC TGAACGCCGA CGGCAAATCG CTGAAGGTCG CGACGAATTC GCCGGCGTCC GCGCTGAGCG GCCCGCCGAA GTTTGTCAAC GACGGCGCGC TCACGCCCGA CTTCTACGGC ATCAACACGA TGCAGCCGGC GTATCAGCCG AGCGGCAACA AGGCGGCCGC GGGCGGCGAT CCGCTGCTCG CCGACCCCGC CAATCCGTCG ACGATGCCGC CGCAGACGGC GACCAACATC GGCGACCTGA TGACCAACGC GGGCGTGTCG TGGGCGTGGT ATTCCGGCGC GTGGGGCCAG GCGCTGCAGG CGAGCCAGAA CGGCACGTCG AACGTGATCT ACGGCGCCGA CCTGTCGACG CCGAACTTCC AGCCGCACCA CCAGCCGTTC AACTACTTCG CGAACCAGGC GCCGGGCACC GCGAGCCGCG CGCAGCACCT GCTCGACGGC GGCGCGAACG GCGCCGAGTT CATCAAGGCG ATCGACGCGG GCACGCTGCC GCAGGTCACG TTCTACAAGC CGCAAGGCAA CCTGAACGAG CACCCGGGTT ACACGGACGT CACGTCCGGC GACCAGCACA TCGCCGACGT GATCGCGCAC CTGCAGGCGA GCCCGCAGTG GAAGAACATG GTCGTGGTCG TCACGTACGA CGAAAACGGC GGCTTCTGGG ATCATGCGAC GCCGCCGAAC GCCGACCGCT GGGGCCCGGG CACCCGCATT CCTGCGCTGA TCGTGTCGCC GTATGCGAAG AAGGGCTTCG TCGATCACAC GCAGTACGAC ACGGGTTCGA TCCTGCGCTT CATCACGCGC CGCTTCTCGC TGCCGCGCCT CGCGGGCCTG CAGCAGCGCG ACGACGCGCT GAAGGCGAAC GGCGCGCAGC CGATGGGTGA CCTGACGAAC GCGCTCGCGC TGTCGCCGAA CCTGTAA
|
Protein sequence | MKKHAWIRYT PIALAAALSL TACGGDDVTQ QGLSAVKNVV VIYAENRSFD NLYGNFPGAN GLQNATAANS VQKDRDGSTM ATLPKIWGGL TATGITPAVT EAMTANLPNA PFAIDDPKGF NQSMSIATRD IVHRFYQDQM QINGGKNDMY AAWTDAGGLT MGHYTADPSK LPLWKIAQQY VLADNFFMGA FGGSFLNHQY LICACAPYYA NADKSPAAGK IAVLNADGKS LKVATNSPAS ALSGPPKFVN DGALTPDFYG INTMQPAYQP SGNKAAAGGD PLLADPANPS TMPPQTATNI GDLMTNAGVS WAWYSGAWGQ ALQASQNGTS NVIYGADLST PNFQPHHQPF NYFANQAPGT ASRAQHLLDG GANGAEFIKA IDAGTLPQVT FYKPQGNLNE HPGYTDVTSG DQHIADVIAH LQASPQWKNM VVVVTYDENG GFWDHATPPN ADRWGPGTRI PALIVSPYAK KGFVDHTQYD TGSILRFITR RFSLPRLAGL QQRDDALKAN GAQPMGDLTN ALALSPNL
|
| |