| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1378 |
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| Symbol | |
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| ID | 4449858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1516506 |
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| End bp | 1517699 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639693416 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_835023 |
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| Protein GI | 116689400 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.696057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGAA TTGCGCCGTT GCCGCCGGAT GGCTGGAACG GCATACTGCC GGCGCGGTAC
GGCTGGCCGG GCACCGGCCA CGTTCCGGTG CGAACCGCCC GGCACGCGCT GCCGCGAGCG
GCGCGTATGC TACCGCAAGC GCGCGCCGCG CGATGCACTT TTTCACGGAA AACTGACTTG
AATCAAACCA CCGACGCCGC CACGCCGTCC CCCGACACGT TGTTGCGCAT CATCGCCGCG
CAAGCCGAAA TCGCGAAACT CGGCCTCGAC CTCGGCAGCG TGATGGCCTA CGTGGCCGAA
CAGGTGCCCC AGCTCACCGG CGCGAGCGCC GCCGCGGTCG AATTCGCCGA AGGCGACGAC
ATGGTGTACC GCGCCGCGTC GGGCACGGCC GCCGGGATGC TCGGCCTGCG GTTGCGGCGC
TCGGGCAGCC TGTCGGGCCT GTGCGTGCAG CAGGGCGCGT TGCTGCACTG TATCGATTCG
GAAACCGACC CACGCGTCGA TCGCGACGCA TGCCGCCGGG TCGGCCTGCG CTCGATGCTC
GTGATGCCGC TCACGCACGC CGACACGACG GTCGGCGTGC TGAAGGTGAT GTCGCCGGAC
GTCGACGGTT TCTCACCGGC CGACGCCGGC ACGCTGCGGC TGATGGCCGA CCTGATCGCC
GCCGCGATGT TCCACGCGGC GCGCAACGAA GCGAACGAGC TGTACCTGCG CGCGACGCAC
GACGCGCTCA CGGGCCTGCC GAACCGCGCG CTGTTCTACG ACCGCCTGCG CCAGTCGATG
CACACGGCGC TGCGCGCGAG CGGCCGGCTC GGCATTCTCA ACATCGACAT GGACGGCCTG
AAGCCGATCA ACGACGGGTT CGGCCACCGC GCGGGCGACG CCGCGCTGCG CGAGGTCGCC
ACGCGGATGC AGGCCGCGGT GCGGCGCTCG GACACGGTCG CGCGCATCGG CGGCGACGAA
TTCGCGGTGA TCCTGCCGAA CCTCGGCACC CGCGACGACG CCCAGGTGCA AAGCACGCGG
CTCGCGCGGC AGGTCGGCGA GCCGTTCGAA TTCGACGGGC ATGCGCTGCG GCTCGGCGTC
AGCGTCGGCA TCGCGATGCT GCCGGACGAC GGCACCGACA TGAACGCGCT GATCGAGCAT
GCGGACCAGG CGATGTACGA AGCCAAGCGA TCGCGGCGCA CCGCGCACGC ATGA
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| Protein sequence | MARIAPLPPD GWNGILPARY GWPGTGHVPV RTARHALPRA ARMLPQARAA RCTFSRKTDL
NQTTDAATPS PDTLLRIIAA QAEIAKLGLD LGSVMAYVAE QVPQLTGASA AAVEFAEGDD
MVYRAASGTA AGMLGLRLRR SGSLSGLCVQ QGALLHCIDS ETDPRVDRDA CRRVGLRSML
VMPLTHADTT VGVLKVMSPD VDGFSPADAG TLRLMADLIA AAMFHAARNE ANELYLRATH
DALTGLPNRA LFYDRLRQSM HTALRASGRL GILNIDMDGL KPINDGFGHR AGDAALREVA
TRMQAAVRRS DTVARIGGDE FAVILPNLGT RDDAQVQSTR LARQVGEPFE FDGHALRLGV
SVGIAMLPDD GTDMNALIEH ADQAMYEAKR SRRTAHA
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