| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1237 |
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| Symbol | |
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| ID | 4450198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1367180 |
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| End bp | 1368166 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639693273 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_834882 |
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| Protein GI | 116689259 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.688283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCT CGCGCCGACA GGTCATCGGC AATCTTGGCG CACTGGCTGC GATGTCCGCA
CTCGGTCCGT CCGCCGCGCA TGCCGTCGAC GCGCCGCCAG CCGCGGAGAG CCTGACGAAT
CCGGTCGGCT TGTACCCGAA GCCGCCGTTC CCGCATCAGG TCCAGGCGCC GCCGGGACTC
GCGAGCCGGA TGCAGCCGCG CCCCGACCAC GGCGAGCAAA GCTATCGCGG CCGTGGCCGG
CTCGTCGGCC GCAAGGCCCT CGTCACCGGC GGCGACTCGG GCATCGGCAG GGCAGCAGCC
ATTGCGTTCG CGCGCGAAGG GGCGGACGTC GCGATCGGCT ATCTCCCCGT CGAGGAATCC
GATGCGCGGG AAGTCGTGGC GTTGATCCGG GCAGCAGGAC GCAAAGCCGT CGCGCTGCCC
GGCGACATCC GCGACGAAGC GTTCTGCCAG CGGCTGGTCG CACGCGCGGC GGCGGAACTC
GGCGGGATCG ACATTCTCGT CAACAACGCC GCCCGACAAC AGGCGCTCGA TTCGATCGAC
GAGATGACGA CCGAGCATTT CGATGCAACG ATCAAGACCA ATCTTTACGG GATGTTCTGG
ATCACGAAGG CGGCCATCCC GCATCTTCCG CCCGGCGCGT CGATCATCAA CACCACGTCG
GTCCAGGCAG TCAGGGCGAG CGCCAACCTG CTCGACTATG CGACGACGAA AGCCGGCATC
ATCGCGTTCA CCCGATCGCT CGCGAAGCAG CTCGGGCCGC ATGGCATTCG CGTCAATGCA
GTCGCTCCCG GCCCCTACTG GACCCCGCTG CAATCGAGCG GCGGCCAGCC ACCGGAGACG
GTCGTCAACT ATGCGGCGGG CTCGCCGTAC GGCAGGCCGG GACAACCGGC CGAAATCGCC
CCGCTGTATG TCGCGCTCGC CTCGTCGGAA ACGAGCTATG CGAACGGGCA GGTCTGGGGC
GCGGACGGCG GGCTGGGAAT TTTCTGA
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| Protein sequence | MRVSRRQVIG NLGALAAMSA LGPSAAHAVD APPAAESLTN PVGLYPKPPF PHQVQAPPGL
ASRMQPRPDH GEQSYRGRGR LVGRKALVTG GDSGIGRAAA IAFAREGADV AIGYLPVEES
DAREVVALIR AAGRKAVALP GDIRDEAFCQ RLVARAAAEL GGIDILVNNA ARQQALDSID
EMTTEHFDAT IKTNLYGMFW ITKAAIPHLP PGASIINTTS VQAVRASANL LDYATTKAGI
IAFTRSLAKQ LGPHGIRVNA VAPGPYWTPL QSSGGQPPET VVNYAAGSPY GRPGQPAEIA
PLYVALASSE TSYANGQVWG ADGGLGIF
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