Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0771 |
Symbol | |
ID | 4450800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 864830 |
End bp | 866059 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639692794 |
Product | polysaccharide export protein |
Protein accession | YP_834417 |
Protein GI | 116688794 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGTT GCATTGTGCG ACAATTCGAG CCGGTCTATA TTTATCGAAC GTATCACATG CCGCCTCTGC TCAATCGTGC CGTACTGCCC GCCCTGATCG TCGGTGTGCT TGCTGGATGT TCCGTTGTTC CCACGTCGGG TCCGAGCACT GCACGTATCA ATCAAGTTGC GGATTCTTCG AGCAATACAG CCGATGCCGT TGGCATCCAG GTCGTTGATA TGACCGATGG TGTCGCGCGC AAGCTCTACG CGGAGCGCGG ACAGACGGAT TTTGCTACAG CGCTTGGGGA CGTGGCGCAA TTTCGTCAGC AACTCGGTGT AGGCGACTCG ATTGAAGTAT CGATCTGGGA GGCTCCACCG GCAACCTTGT TTGGTGCACT GCAAGGCGAC AGCCGAGGCG GCCCGAGCAA CGCTCGCGTT ACTGTTCTTC CGGACCAGAC TATCGATGGA AGTGGGATGA TCAACGTGCC GTTTGTCGGA AATGTGAAAG CCGTCGGGCG GACGCCGGTA CAGCTGGCAG CTGATATCAC TGGGCGCTTG AAGAACATCG CACATAGTCC GCAGGTCCTC GTGAAGCTGT CGCGCAACGC CACGTCGTAC GTTACGGTTG TCGGAGACGT CGTCAACAGC AACCGCATGC AACTCTCGGC TCGCGGCGAG CGGCTGTTGG ACGCTCTTGC AAACGCGGGT GGGGTTCGGC AACCCATTGA CAAGATCACC CTGCAGGTCA CGCGCGGCAA CGAAGTTGCA TCGTTACCGC TACAAACCGT CATTCGCGAT CCGAGGCAGA ACGTTCCTTT GCGCGCCGGC GACGTCGTAA CGGCATTGTT TCAGCCTTAC AGTTTCATGG CGCTCGGTGC GACCGGCAAG AATCAGGAAA TCAACTTTGA AGCGCAGGGG ATTACGCTTG CGCAAGCGCT TGCACGGGCT GGCGGATTGG AGGATTCCCG CTCCGACGCC AAGGGTGTGT TCGTATTTAG AATGGAAAAG GCGAATGCGC TTACATGGCC CAAGTCGCCG GTTCGTACCA CGGTAGACGG CAAGGTGCCG GTCATTTACC GGCTCAATTT ACACGATCCA AATTCATTTT TCGTCTCTCA GAGTTTCATG ATGGACAACA AGGATTTGCT TTACGTTTCG AATGCGCCAA TTACTGACAT TCAGAAGGTG CTTAATCTGG TATTTTCTGT CGCTTACCCG GTCGTTACTG GTGTTCAGAC ATTTAAGTAA
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Protein sequence | MASCIVRQFE PVYIYRTYHM PPLLNRAVLP ALIVGVLAGC SVVPTSGPST ARINQVADSS SNTADAVGIQ VVDMTDGVAR KLYAERGQTD FATALGDVAQ FRQQLGVGDS IEVSIWEAPP ATLFGALQGD SRGGPSNARV TVLPDQTIDG SGMINVPFVG NVKAVGRTPV QLAADITGRL KNIAHSPQVL VKLSRNATSY VTVVGDVVNS NRMQLSARGE RLLDALANAG GVRQPIDKIT LQVTRGNEVA SLPLQTVIRD PRQNVPLRAG DVVTALFQPY SFMALGATGK NQEINFEAQG ITLAQALARA GGLEDSRSDA KGVFVFRMEK ANALTWPKSP VRTTVDGKVP VIYRLNLHDP NSFFVSQSFM MDNKDLLYVS NAPITDIQKV LNLVFSVAYP VVTGVQTFK
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