Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0624 |
Symbol | |
ID | 4450008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 696210 |
End bp | 697025 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639692647 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_834270 |
Protein GI | 116688647 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0853252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCG ATACTTCCGC GCCTGACTCG CAGGCTACGC ACGCCGCGAG CGACGCGCGT TTCGCGCGCT ACCCGAGCCT CGAGGATCGC GCGGTGCTGA TCACGGGCGG CGCGACCGGC ATCGGCGCGT CGTTCGTCGA GCACTTCGCC GAACAGGGCG CGCGCGTCGC GTTCGTCGAC CTCGATGCGG CGGCCGGCGC CGCGCTCGCG GAACGCCTCG CGCACGTACG CCATGCGCCG CTGTTTCTCT CGTGCGACCT GACCGACATC GATGCGCTGC GCCATGCGAT CGATGCGATC CGCGCGCGCA TCGGCGCGAT CGCGGTACTC GTGAACAACG CGGCGAACGA CGCGCGCCAC GCGATCGGCG ACGTGACGCC CGCGTCGTTC GACGCGGGCA TCGCGGTGAA CCTGCGTCAC CAGTTCTTTG CCGCGCAGGC GGTGATCGAC GACATGAAAC GGCAGGGCGG CGGCGCGATC ATCAATCTCG GCTCGATCAG CTGGATGCTG AAGAACGGCG GCTATCCGGT CTACGTGATG GCGAAGGCGG CCGTGCAGGG CCTGACGCGC GGCCTCGCGC GCGATCTCGG CCCGTTCGGC ATCCGCGTGA ATTCGCTGGT GCCCGGCTGG GTGATGACCG ACAAGCAGCG CCGGCTGTGG CTCGACGACG CGGGCCGCGC GGCGATCAAG GCCGGCCAGT GCCTCGACGC CGAACTGCTG CCGGCCGACC TCGCGCGGAT GGCGCTGTTT CTCGCGGCCG ACGACAGCCG GATGATCACC GCGCAGGACG TGATCGTCGA CGGCGGCTGG GCCTGA
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Protein sequence | MTIDTSAPDS QATHAASDAR FARYPSLEDR AVLITGGATG IGASFVEHFA EQGARVAFVD LDAAAGAALA ERLAHVRHAP LFLSCDLTDI DALRHAIDAI RARIGAIAVL VNNAANDARH AIGDVTPASF DAGIAVNLRH QFFAAQAVID DMKRQGGGAI INLGSISWML KNGGYPVYVM AKAAVQGLTR GLARDLGPFG IRVNSLVPGW VMTDKQRRLW LDDAGRAAIK AGQCLDAELL PADLARMALF LAADDSRMIT AQDVIVDGGW A
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