Gene Bcen2424_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0405 
Symbol 
ID4448127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand+ 
Start bp456463 
End bp457047 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content75% 
IMG OID639692422 
Product2'-5' RNA ligase 
Protein accessionYP_834052 
Protein GI116688429 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.523196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCG ACCGGCTCCG TGCGTTCGTC GCGCTGATGC CCGATGCGGC ATCGCGCGAC 
GCGCTGCACG CGTTGCCGGT TACCCGCGGG GCGCGGCGTA CGCTGCCCGC GCAACTGCAC 
ATGACGCTCG CGTTCATCGG CGCAATCGAG CGGGAGCGGT GCGACGCGCT GGCCGCGCAC 
CTGCCCGCGC TCGCGGCCGC GCATGCGTTG CCGTCGTTGC CGGTCGAGCG GATCGCGTGG 
TGGCCGAGCC TGCCGCGTGC GCGGCTGATC GTCGCGGAGC TCGCGGCCGA TGCCGCTTGC 
GTCGCGCTGA ATGCGGGGCT GGCGGCGCTG TTGCGCGAAC TCGGCGTGCC GGCCGACCGG 
CGGCCGTTCC GGCCGCACGT GACGCTCGCG CGGCTGCCGC ACGATGCGAT CGGCCAGCCC 
GCGCACGGCG GCGCGCCGGG GCGGCCCGTC GAGGTGCGCG TCGAAGCGCT GACGCTGTTC 
GAAAGCCGGC TGTCGCAGGA GGGCGTGTCG CATCGGCCGA TCGTATCGGC GCCGATTGCA 
CGCGCGGACG ACAGCGTCGG CGCTGAGGAG CGGCCCCACG AATGA
 
Protein sequence
MNGDRLRAFV ALMPDAASRD ALHALPVTRG ARRTLPAQLH MTLAFIGAIE RERCDALAAH 
LPALAAAHAL PSLPVERIAW WPSLPRARLI VAELAADAAC VALNAGLAAL LRELGVPADR 
RPFRPHVTLA RLPHDAIGQP AHGGAPGRPV EVRVEALTLF ESRLSQEGVS HRPIVSAPIA 
RADDSVGAEE RPHE