Gene Bcav_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4192 
Symbol 
ID7858120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4620618 
End bp4621511 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content71% 
IMG OID643868292 
Productbeta-lactamase domain protein 
Protein accessionYP_002884192 
Protein GI229822666 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCACT TCACGCAGAT CGTGCAGGAC GTCCTCCTGC TGAAGGTCCC GTTCACGGGT 
GTGTGGACGG GCGTCACGCT GGTCCTCGGT GAGGGGCCGC CGATCCTCGT GGACAGCGGC
GGCATGGCCG AGACGGTGGA CTCCACGATC GTGCCGGCGC TCGCCGAGCT CGGCATGGGT
CTGTCCGACA TCGGGTGGGT GCTCGCCACC CACATCCACG GCGACCACGT CGGGGGCATC
GCGCGCATGC GCCAGCTGGC GCCCTCCATC CAGGTGGGCG TGCTGCGCGA GTCCGACGAG
CGCATGCGTG ATCCGCTCGC GTACAGCCGC GAGATCCGTG CCGCGTTCCC CGAGCACAGC
GCCGCTCCCC CGCCCGTGCT CGACGGCGTC ACGCCGGATC GGCTGCTCGA CGACGGCGAC
ATGGTGGGCC CGCTGCGAAC CATCCATACG CCCGGCCACG ACACGGACGC CTGCTGCTTC
TTCGACGTCC GCTCGGGCAC GGTGATCACC GGCGACTCGC TCCAGCTCAA CGGGACGGTG
TCGCAAGGGT GCGCGTTGCT GTTCGACCCC GAGCGCTACC TGCCCTCATT GCAGCGGCTG
CTCGCGTTGC CGGTGCGGAA CATCGTCTGC GGACATCCGT ACCTGCCGCT GGGCGAGGTC
GCCATCGGCG AGGACGCCGC CCGCCAGTTC CTCGCGGCCT GCATCGGGTG CTACGAGCAC
GACCGCGGGT TCGTGGCCGG CATGGCGGCA GCCGGCGTCA CCGATCCCCA CACGGTCGCG
CGCGCACTGG TCGCCGCGGT CGACGGCGTG GAGCCGGCGA AGCTGTTCCT CCCGATGCAC
ACGGTGGCCG CGTACCAGGA GCTGGCAGCG GCGGACAGGA GTACACGCAC ATGA
 
Protein sequence
MEHFTQIVQD VLLLKVPFTG VWTGVTLVLG EGPPILVDSG GMAETVDSTI VPALAELGMG 
LSDIGWVLAT HIHGDHVGGI ARMRQLAPSI QVGVLRESDE RMRDPLAYSR EIRAAFPEHS
AAPPPVLDGV TPDRLLDDGD MVGPLRTIHT PGHDTDACCF FDVRSGTVIT GDSLQLNGTV
SQGCALLFDP ERYLPSLQRL LALPVRNIVC GHPYLPLGEV AIGEDAARQF LAACIGCYEH
DRGFVAGMAA AGVTDPHTVA RALVAAVDGV EPAKLFLPMH TVAAYQELAA ADRSTRT