Gene Bcav_4169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_4169 
Symbol 
ID7858097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4596139 
End bp4597137 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content73% 
IMG OID643868269 
ProductDNA primase small subunit 
Protein accessionYP_002884169 
Protein GI229822643 
COG category[L] Replication, recombination and repair 
COG ID[COG3285] Predicted eukaryotic-type DNA primase 
TIGRFAM ID[TIGR02778] DNA polymerase LigD, polymerase domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAG CCAAGCAGGT CGAGCTGCGC GACGGCGTCG AGCTCACCAA CCTCGACCAG 
CCGCTGTTCT CCGGGGCTGA CGCGACGAAG CGGGATCTCG TCGACTACCT CGACGCCGTC
GCGGGGCCGT TGCTGCGCGA GCTCGCCGGT CGTCCGCTCT CGGTGGTGCG CGTGCGCCCG
GGAGCGCCGC CGTTCATGCA GAAGAACCTC CCCGACTACG CGCCGGACTT CGTCCGCTCC
GTGACCGTCT GGTCGGACGC CGGGCACCGC GAGATCCACT ACCCGATCTG CGAGGACCGG
CGCACGCTGC TGTGGCTCGC GAACCAGCGT GCGGTCGAGT ACCACCCGAC GCTGATGCTG
CCGGCTACGC CGTCGGCCTC GCAGGAACGC GTCGAGATCC TGGCGGGTGC GGTCACGCAC
CTGGTGCTCG ACATCGATCC ACCCGAGGGC AGCGGCTTCG ACGTCGTCGT CGCGACGGCG
CGGCTGGTCC AGGCGGCGCT CACGGACGCC GGGCTGCGCG GCGCCGTCAA GACGTCGGGG
TCCAAGGGCG TCCACGTGAT CGTGCCGGTC ACCGGCATCG AGCTGCCGGA CGCCGCGGCG
GCCACCCGGG CCCTGGCGGC CAGGGCGGAA CGGCTGGACC CCTCCGTGGC GACCACCGCG
TACATCAAGG CCGATCGGGG CGGGAAGGTG TTCCTCGACG CCACCCGCTC GGGCGGCGCG
TCCCTGGCCT GCTGCTACAG CCCGAGGGTG CGGCCGGGCG TCCCGGTCTC CTACCCGGTG
CCGTGGGAGG ACCTCGAGGA GGTCACGCCA GCCGCGTTCA CGATCCGGTC CGTACCGGCC
ATGCTCGACG GCGACCCGTG GGCGGCGTCG CTGCCGTCAC CGCAGACCGT GCCGGCAGAC
GTGATCGCCG AGGGTCACAC GATCCCCGTC GCACGCGTGG CGGCCATGCA CGAGGGCAAG
AGGCGCAAGC GTGCTGCGGA GCGCGACGCG GCTGGGTGA
 
Protein sequence
MARAKQVELR DGVELTNLDQ PLFSGADATK RDLVDYLDAV AGPLLRELAG RPLSVVRVRP 
GAPPFMQKNL PDYAPDFVRS VTVWSDAGHR EIHYPICEDR RTLLWLANQR AVEYHPTLML
PATPSASQER VEILAGAVTH LVLDIDPPEG SGFDVVVATA RLVQAALTDA GLRGAVKTSG
SKGVHVIVPV TGIELPDAAA ATRALAARAE RLDPSVATTA YIKADRGGKV FLDATRSGGA
SLACCYSPRV RPGVPVSYPV PWEDLEEVTP AAFTIRSVPA MLDGDPWAAS LPSPQTVPAD
VIAEGHTIPV ARVAAMHEGK RRKRAAERDA AG