Gene Bcav_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3963 
Symbol 
ID7858026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4383443 
End bp4383826 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content68% 
IMG OID643868066 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_002883966 
Protein GI229822440 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.368494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAGG ACGGCTGTGA GGTCTTCGTC TCGGACTGCC ACGTCCGAGC CGCGGTCGAG 
CTCATCAACC ACACCTGGGA CCCGGTCGTC GTCTCCGCTC TGCGCATGGG ACCGACCCGA
CGCAGCGTTC TCCTGGGTCG CATCTCGGGC GCGAGCGACA AGGTGCTGAC CGAGTCCCTC
CGACGTCTGA CCTCGCACGG CCTGGTGACC AGGGCTTCGA GCGAATCGCG ACGAGACACG
GCCCTCTACG AACTCACCGC GTTGGGAGCG TCATTCGCCA GCGGCCCCTT GGCCCATCTC
GCCGAGTGGG CAGCCGAGCA TCAGGTCGAA CTCTCGTCCC GGCAGCCTCC CGCTGGCGGA
GGACGGACGT CGGAGCCTGC CTAG
 
Protein sequence
MNKDGCEVFV SDCHVRAAVE LINHTWDPVV VSALRMGPTR RSVLLGRISG ASDKVLTESL 
RRLTSHGLVT RASSESRRDT ALYELTALGA SFASGPLAHL AEWAAEHQVE LSSRQPPAGG
GRTSEPA