Gene Bcav_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3961 
Symbol 
ID7858024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4381280 
End bp4382479 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content74% 
IMG OID643868064 
Productvon Willebrand factor type A 
Protein accessionYP_002883964 
Protein GI229822438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.308126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC GGATGCTCTG GCCCCTCTGG GTCATCGTGA TCGTGTTCGG CCCGCTGCTC 
GCCCTGACGA TCTGGCAGGC GGTGCGCCAC ACCGGCGGAC GCCGTCGCGA CTGGTTCCGC
CGCGCGGGCA TCGTGGCCGG CGTCGTCGTC ATCGGGCTCT GCCCGGCCGT CCCGGACCGG
CAGGGGCAGA CCCTGCAGTC GAACGCGGAG CTGTTCTTCG TCGTCGACCG CACCGGCTCC
ATGGCCGCCG AGGACTGGAA CGGCGGGGCG CCGCGGCTCG ACGGCGTCCG GAACGACCTC
GTGGCCCTCA CCGAGGCGAT GGCCGGGGCG CGCTACTCGA TCATCGGGTG GGACTCCCAG
GCCACGCGCC AGCTGCCGCT GACGACCGAC GCGCGGGCGG TGCGCTCGTG GGCCGACACG
CTGCGCCAGG AGGTGTCCGC GTACTCCGCC GGCACCGCCG TCGACCGACC GCTCGAGGCG
CTGCGCGACG CCCTGGAGGG CGCCGCCGAG CGCAACCCGG GCAACGTCCG GCTCGTCTTC
TTCCTGTCCG ACGGCGAGAA CACGAACGGC GACGACTCCG CGGCGGGCGA GATGGCGTCG
TACGAGGAGC TCGCGCCGCT GGTCGACGGC GGTGCGGTGC TCGGCTACGG CACGTCCGAG
GGTGGCCGGA TGCGCATGTA CGACGGCACC GACGCGACGG GCGCGGGCAC CGACGCCCCC
TTCATCACCG ACCCCACCCA GTCGGGTTCG CCTGACGCGA TCTCCCGCAT CGACGAGACG
ACGCTCCGCA CGATCGCCGA GCAGCTCGGC GTGGAGTACT CGCACCGCAT CGAGCCCAGC
TCCGTCGACT CCCTCGTGTC GGGCATCGAC GTGCAGGACA TCGCGAGCGA CGGACGGCGC
GAGGTCACCA CGTACACGGA CGTGTACTGG CCGGCGGCGC TCGTCGTCGC GCTGCTGCTC
GCGTGGGAGG CGTGGTCCAT CGGCCGCTCC GTGCCTGCGG CGACCCGCGG CGACGACGAC
GGTCGCCGTG CTCGCGCGCG CGCCAGGTCA CGGGAACGTG CGGCGGCGCA GTCGCGGACC
GGCGCCGGGG CGAACGGGGC TCCGGCCCTG CCGCCGCTGC CCGGCGCGAC CGCACCGCTC
GACCCGGCGG GTGGCTCGGC ACAGCAACCG ATCGGCGCCG GACGAGGGGG GAACGGCTGA
 
Protein sequence
MTLRMLWPLW VIVIVFGPLL ALTIWQAVRH TGGRRRDWFR RAGIVAGVVV IGLCPAVPDR 
QGQTLQSNAE LFFVVDRTGS MAAEDWNGGA PRLDGVRNDL VALTEAMAGA RYSIIGWDSQ
ATRQLPLTTD ARAVRSWADT LRQEVSAYSA GTAVDRPLEA LRDALEGAAE RNPGNVRLVF
FLSDGENTNG DDSAAGEMAS YEELAPLVDG GAVLGYGTSE GGRMRMYDGT DATGAGTDAP
FITDPTQSGS PDAISRIDET TLRTIAEQLG VEYSHRIEPS SVDSLVSGID VQDIASDGRR
EVTTYTDVYW PAALVVALLL AWEAWSIGRS VPAATRGDDD GRRARARARS RERAAAQSRT
GAGANGAPAL PPLPGATAPL DPAGGSAQQP IGAGRGGNG