Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3954 |
Symbol | |
ID | 7858017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4373934 |
End bp | 4374371 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643868057 |
Product | CHRD domain containing protein |
Protein accession | YP_002883957 |
Protein GI | 229822431 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.689351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0638434 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCACGT CCACACGAAC CCGTCTCGGC GCCGTCGTCC TCGGTGCCGC CCTCTGCGCC GCTCTCGTCC CGGCCGCGGC CGCCTCCGGT AGCCCGGCGA TCCCGCTGAA CGTCGGCCAG GAGACCACGG GCTCGAACAC GGGCGCCCAC GGCTTCTTCT CCTACGAGAT CTCGGGCGAC CAGCTCTGCT ACACGATGTC GGCCCGGAAC CTCTCGGTCC CGGCCGTCGC GGCGCACATC CACGTCGGCG AGCGGAAGGT CGCCGGGCCG ATCGTCGTCC CGCTCGACGT CGGAACCGGC ACCACCTGGT CGATCTCCGA CTGCGTGACC GCCGACCCGG CGCTGCTCGC CGCGATCGAG GCGTCCCCGC GCGACTACTA CATCAACGTC CACACACCGA CGTTCCCGGG CGGGGAGATC CGCGGTCACC TGAAGTGA
|
Protein sequence | MRTSTRTRLG AVVLGAALCA ALVPAAAASG SPAIPLNVGQ ETTGSNTGAH GFFSYEISGD QLCYTMSARN LSVPAVAAHI HVGERKVAGP IVVPLDVGTG TTWSISDCVT ADPALLAAIE ASPRDYYINV HTPTFPGGEI RGHLK
|
| |