| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3939 |
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| Symbol | |
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| ID | 7858002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 4358286 |
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| End bp | 4359134 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643868042 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002883942 |
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| Protein GI | 229822416 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTGC TTGCCGGGCG ACGCGCCGTC GTCGTCGGCA CGCGCTCGCG GATCGGGGCG
ACGATCGTCG CGGCCCTGGT CGAGCACGGT GCCCGCGTGG TCGGCGTCGA CCGGGAGGCG
CCGCGCGACG ACGCCGAGGC GCCGCCGTTC GAGCGGCACG TCGTGGCGGA CATGAGCACC
GCCTCCGGCG CGGACGCCGC GTTCACGGCC GCCGTCGATC ACCTCGGCGG GCTCGACCTC
GTGGTCTCCG GCGCCGCCGT GCAGCGCGGC GGGCGGCTGT GGGAGACGGG CGAGGACACG
TGGCGCGCCG TGCTCGGCGG CACGCTCGAC ACGGCGTTCC ACACGATGCG GGCCGGGTTG
CTGCACCTGC GCCGCGGCGG CGCGCTCGTC GCCGTCTCGT CGGTGAACGC CGACGTCGTC
CACCCCGCGA ACGCCGCCTA CGCCGCGTCG AAGGGCGCCG TGAACACGCT CGTGCGCCAG
GCGGCGCTCG ACTGCGCCCC GCGCGGGATC CGTGTCAACG CCGTCGCCCC TGCGCTCGTC
GACGGCGATC CCGAGCGCTC GTCGTACGGC TACCCGATGG GCCGCACGGT GACGTCGCGC
GAGGTGGCGG ACGCCGTCGT CCTCCTCGCG TCGCCGCTCG CGTCCGGGAT CACCGGCGTG
GTGCTGCCGG TCGACGCCGG GCTGTCCGGC ACCTCGGCCG TCGCGATGAG CCGGCCCGAG
ATGCTCGAGA AGCTGCGTGT CGGCGCGCTC ATCGAGGACG CGCAGCCCGG CTCGCCCGGC
GGGTTCCGAC CAGGCGTCAT GGACGATGCC GCACTCCAGA TACGTCGTCG GGGACTTGAC
CACCCGTGA
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| Protein sequence | MNLLAGRRAV VVGTRSRIGA TIVAALVEHG ARVVGVDREA PRDDAEAPPF ERHVVADMST
ASGADAAFTA AVDHLGGLDL VVSGAAVQRG GRLWETGEDT WRAVLGGTLD TAFHTMRAGL
LHLRRGGALV AVSSVNADVV HPANAAYAAS KGAVNTLVRQ AALDCAPRGI RVNAVAPALV
DGDPERSSYG YPMGRTVTSR EVADAVVLLA SPLASGITGV VLPVDAGLSG TSAVAMSRPE
MLEKLRVGAL IEDAQPGSPG GFRPGVMDDA ALQIRRRGLD HP
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