Gene Bcav_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3799 
Symbol 
ID7860538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4215652 
End bp4217358 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content75% 
IMG OID643867902 
ProductLPXTG-motif cell wall anchor domain protein 
Protein accessionYP_002883803 
Protein GI229822277 
COG category 
COG ID 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCA CCCGCCGGGC GCACCACCCC GCGCGCGTCC TGACCAGTGC ACTCGTCGGC 
GTCCTCGCTC TCGCGGGCGT CGCCGCTGCC GCCGCGCCCG CCTCGGCCGA CGACCCGGAC
GGCTTCAACC CGTTCGTCGC GGCAGGCGGA TACAGCGTCT ACGCGCGCGA GGACGCCGTC
CTCGGCAACG CGGAGACGGA GGGCGCGATC GCCGTCGGCG GCACGCTCCG CATCGACAGC
GACGGGTACT CCGTGCTGCA TCTCGCGGCC GGCACCGGCG CCTACACGAT CCCGACCGTC
GACGGCGATC CCACCCGGCT CCTCATCGGC ACGCTCGACG AGTCGAGCCC GGGCATCGTA
CGCATCACGA ACGCGGGCGC CCCGGCGGGT ACCGCCGAGG CCGAGGGGTA CCTCAAGATG
ACGACGGCGG ACCCGGCGTT CACCGTCGTC GACCGTGCTG GCTTCATCCG CTACCTGCGC
CTCGGCGCCG ACGTCGACGC GGCGCCGTAC ATCGACGCGA TGGCGCAGGC CTATCCCGCG
CCGCCCGCGG ATCCGATGGC GTCGGTCCTG ACCGAGCAGA GCTCGGTGGC GGCGTACGTC
GAGGCCGGCA TGACGTGGAC GTACGACCAG GCGGCGCAAT GCCTCGCCTC CGTCGCTGAT
CCCGGGACCG GCCTCGCGCA CCACGTGGGC GTCGCGGAGG ACGTCGGCGA CCGCGTCGTC
CTCGAGCCGC TCTCCGACGC GCAGCCCAAC GTCGTCTCGT ACTCCGACAT CGCCGGCGCC
GGGCTCCTCC AGTTCAGCGG CTCGGTGACG CCAGGTGCCG CCAACCCGCT CGTCATCCGC
GTGGACGCCG GCACGACGGC GGTCTCCACG CCGCGGACGG ACTCGGTCGC GTACGCGCCG
TACATCATGT GGGATCTGTC AGCCGTCACC GGCCCGGTCA CGGTGAGCGC GGCATCGTCC
CGGATCGACG GCTCGATCTA CGCGCCCGAC GCCGCCGTGA CGGTGCTCGC GCAGCCTCTC
GACGGGCAGG TCATCGGGCG GGACGTCCAC CTAGCCGACC GCTCCGGCGA GGCGCACGCC
TACTTCTTCG CCGGGACGCT GCCGTGCGGC ACGGTGACCC CGCCCGTGAC CGGCGGCTTC
ACGGTGGCGA AGACCGTCAC CGGCGACGCC GCGGCCGCGG TGCCCGCGGA CACCGCCTTC
ACCGTGGAGT ACCGGATCGA CGGCGGCCCG GCCGTGGCCG TGGAGCTCAC CGCGGGCGCG
GTGTCCGACC TCGTGGACGC GCTGCCGGTG GGCACTGTCG TGTCGGTGCG CGAGGTGACG
CCGCTCCCCG TGGTCGACGG CGTCGCCTGG GGCGCACCCG CGTGGACCGT CGACGGCGTC
GCCGTCGAGG CGGACGCCGA CGGCTGGGTG ACGGTCACGA TCACCGGGGC CGACGCCGTC
GAGCTCGCGC TGACGAACGT CGCGACGCCG GACGATCCGA CCGACCCGGT GGACCCGACC
GACCCCGTCG ACCCGACCGA CCCGAGCGAC CCCGTCGACC CGGCAGAGCC GAGCGACCCG
GCGGACCCCA GCGCTCCGCC ATCGTCCTCG ACGGACGGGA CGCTGCCGGG CACCGGCGTG
GACGCGGGAT GGGCGCTCGC GGCGGTCGGC GCGGCGGTGC TCGCCGGAAC GAGCCTGGTG
CTCGTCGCGT GGCGGCACCG GGCCTGA
 
Protein sequence
MSITRRAHHP ARVLTSALVG VLALAGVAAA AAPASADDPD GFNPFVAAGG YSVYAREDAV 
LGNAETEGAI AVGGTLRIDS DGYSVLHLAA GTGAYTIPTV DGDPTRLLIG TLDESSPGIV
RITNAGAPAG TAEAEGYLKM TTADPAFTVV DRAGFIRYLR LGADVDAAPY IDAMAQAYPA
PPADPMASVL TEQSSVAAYV EAGMTWTYDQ AAQCLASVAD PGTGLAHHVG VAEDVGDRVV
LEPLSDAQPN VVSYSDIAGA GLLQFSGSVT PGAANPLVIR VDAGTTAVST PRTDSVAYAP
YIMWDLSAVT GPVTVSAASS RIDGSIYAPD AAVTVLAQPL DGQVIGRDVH LADRSGEAHA
YFFAGTLPCG TVTPPVTGGF TVAKTVTGDA AAAVPADTAF TVEYRIDGGP AVAVELTAGA
VSDLVDALPV GTVVSVREVT PLPVVDGVAW GAPAWTVDGV AVEADADGWV TVTITGADAV
ELALTNVATP DDPTDPVDPT DPVDPTDPSD PVDPAEPSDP ADPSAPPSSS TDGTLPGTGV
DAGWALAAVG AAVLAGTSLV LVAWRHRA