Gene Bcav_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3798 
Symbol 
ID7860537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4214282 
End bp4215499 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content74% 
IMG OID643867901 
ProductROK family protein 
Protein accessionYP_002883802 
Protein GI229822276 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATCT CGGCACACAT CGACAGCAGG GGGCCCGGAG GCGCCGACGG CGCGCCGGCC 
CGGATCGCGG GCGCCGGCTC GATCCTCCAG CTGATCCGCT CCGGAAGCGC CGTCACCATC
TCGAGGATCG CCGCCACCCT CGGGGTATCG CGCTCCACCG TCACGGAGCG AGTCGACCTG
CTGATGTCGT CCGGCCTCGT GGAGTCGGAC GGAGAGACCC AGATGGGACG GGGCCGACCG
TCGGCGCGCT TCGCGTTCCG TCCTGACACC GGACTGACGG TGGGGATCCA GCTGGGCATG
TCCGGGAGCC GGGTCGCCGT CACCGACCTC GCCGGCGAGG TGCTGACCAG CCGGACCGTG
GACGTCGACG TGGCGACGGG GCCACACGTC GTGCTCGACG CCGTCTGCGA GGCGGTCGAC
GACGAGCTGG CCTTGGTCGG CCGGGAACGG GAGGAGCTCT GGGGAGCAGC TGTCGGCGTT
CCGGGCCGGG TCGAGCTCGC GACAGCGGAC GTCACCCCTG ACTCCCCGAG CTGGGCCGGC
TTCGACGTCG CGGCGCACGT CGGTGCCGCG CTGGGCGTCC CTGTCCGCAT GGGCCGAGAC
GTCAGCATGC TCGCCCTGGC GGAGCACCGG TACAACTGGC CCGACGCTCG CGTCCTCCTC
TGCGTCAAGG TCGGTACGGC GATCGGGTGC GGGATCGTCG TCGACCACCG GACGATCGAC
GGCGGCGCCG GGCTCGCCGG CGAGATCGGC CACACGGCGG TCTCCGGCAG CACGGCCCAG
TGCCCGTGCG GGAACCGCGG CTGCCTCAAC GCGACGTCGG CGGGCGCGGC GCTCCTGCCG
CGCCTGGCCG AGATGGGCGT GACGGCGTCG TCGACCCGCG AGATCATGCG GCTCGCACTC
CAGGGCGATC CGACGACGGC ACAGCTCGTC CGGCAGGCGG GGCGCGAGGT CGGCGAGGTG
CTCGCCGGCG CGATCAACCT GCTCAACCCG GACGTCGTCG TCGTGTGGGG ATACCTCGCC
GACGCCCGCG ACAACCTCCT GGCCGGGATC CGGGAAGCCG TCGCCACGCG TGCGGTGCCG
CCGGCCACCG AGTCCCTCAC GATCGCGCGG GCGTCCCTCG GCGAGGACGC CGGGACGCTC
GGCGCCGCCA CGCTCGCCAT CGAGATGCTC CTCGAGCCGG CGGCGATCGA CGCGCGCCTC
GCGCGCCGCG CGGGCTAG
 
Protein sequence
MAISAHIDSR GPGGADGAPA RIAGAGSILQ LIRSGSAVTI SRIAATLGVS RSTVTERVDL 
LMSSGLVESD GETQMGRGRP SARFAFRPDT GLTVGIQLGM SGSRVAVTDL AGEVLTSRTV
DVDVATGPHV VLDAVCEAVD DELALVGRER EELWGAAVGV PGRVELATAD VTPDSPSWAG
FDVAAHVGAA LGVPVRMGRD VSMLALAEHR YNWPDARVLL CVKVGTAIGC GIVVDHRTID
GGAGLAGEIG HTAVSGSTAQ CPCGNRGCLN ATSAGAALLP RLAEMGVTAS STREIMRLAL
QGDPTTAQLV RQAGREVGEV LAGAINLLNP DVVVVWGYLA DARDNLLAGI REAVATRAVP
PATESLTIAR ASLGEDAGTL GAATLAIEML LEPAAIDARL ARRAG