Gene Bcav_3689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3689 
Symbol 
ID7861031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4106068 
End bp4107981 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content74% 
IMG OID643867792 
ProductABC transporter related 
Protein accessionYP_002883693 
Protein GI229822167 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.143728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC AGACGGCAGA GAACACCGAG CAGGGTGTGC CCGAACGGAC CACGCGGGAG 
AAGGCCCGCA TCCTGTGGGC GTACGCCCGC CCTCACAAGG GCGTCCTCGC CGTCGCCCTC
GTGCTCGGCG CGCTCGGCGT CGCTGCCGAG CTCGCCACAC CGCTCGTCAC GAAGGCGGTG
CTCGACGGCC TCGAGATGTC CGCGTCGCTG CGCACGCCGA TCACGATCCT CGCGGTGCTG
CTCGTCGCGG GCTCCGTCGT CGGGCTGATC CAGGGGATCA TGCTCGGCAC GCTCGCGGAG
CGGATCATCC TGGCCGCGCG CACCGGGATC GTCCGTCACC TCCTGGGTGC GCGCGTGCCC
GAGGTCACCG CGCGCCCGCC GGGCGAGCTC GTCACGCGGG TCACCTCCGA CACGCTGCTG
ATCCGCGAGG CGACGACGTC CAGCGTCGTC AACTTCGTCA ACGGCCTCAT CGGGCTCGTC
GGCGCGATCG TGCTCATGGC CTACCTCGAC GTCGTGCTGC TCGGCACGAC GGTGGCGGTC
CTGGTGCTCG TCGGGATCTG CGTCGTCGTG CTCATGCCGC GCCTCTCGAA GGCCCAGCAG
GAGGCCCAGG AGCACGTCGG CAAGCTCGGC GGGCGGCTCG AGGGCGTCGT CCGCGCCCTG
CGTACCGTGA AGTCCGCCCG CGCGGAGACG CGCGAGACGA GCCGGATCTC GGCGCACGCG
GAGGACTCCG CCCGGGCCGG GATCCGCGCC GTCAAGCTCG AGAACGTCTC CTGGACCATC
ACCGGCGCCG GGGTGAACCT CGCCGTCATG CTGCTGCTCG GCGTCGGGGC GTGGCGCGTG
TCCACCGGGG CGATCACCGT GACCACGCTC GTCGCGTTCC TGCTCTACGT CTTCCAGCTG
ATGATGCCGG TCATGCTGCT GACGATGGCG CTGACGTCGC TGCAGTCCGG CCTTGCCGCT
GCCGCGCGGA TCAGCGACGT CGAGGACATG GAGCTGGAGG CCGACGACGA CGGCGCCGTC
GCCTCGCGCG CGCAGGTCAC CGATCGTGCG GGTCAGGTCG CGACAGGCTC GGCTGGGGCG
AGCCCGCCCG AGCCGCCCGC GCTCCGGCTG CGCGACGTGA CGTACCGCTA CCAGACCGCC
GACGGCGTCG CCCCGGCCCT GAACGGTGTC TCGATCAGCG TGCCGCGCCG CGGCCACACG
GCGATCGTCG GACCGTCCGG CGCCGGGAAG ACGACGATCA TGTCGCTGCT GCTGCGGTTC
CTGACGCCGG AGGACGGGCG GATCGAGCTC GACGGCCGCC CGTACGCGGA GTGGACCACC
GACGAGATCC GGTCGCGGAT CGCGTACGTG GAGCAGGACA CGCCCATCGT GCCCGGGACG
CTGCGGGAGA ACCTCGCGTA CGCCGCTCCG GACGCCTCGG ACGCGCGGGT GTGGGCCGCC
GTCGACGCCC TGCGCCTCAG TGCACGGGTC GCCACGATGC CGGACGGTCT CGACACCGAG
GTGACGTCGG CCGAGCTCTC CGGGGGGGAG CGGCAGCGCG TGGCGGTCGC CCGGGCGCTC
GTGGCGCAGC CGGAGATCCT GCTGCTGGAC GAGGCGACGG CGCAGCTCGA CGGCCTCACC
GAGGCGGCGC TCGCGGGGGC CATCCGCGAG GTCGCGGCCA CCGGGGCGGT CGTCACGATC
GCGCACCGGC TCTCCACGGT CGTCGACGCC GACCAGATCG TGCTCCTCGA GCGCGGGCGC
GTGCGCGCCG TCGGCCGGCA CGCGGAGCTG CTCGAGGCGG ACGAGCTGTA CCGGGAGCTG
GTTGCCGCGC TGCGGCTCGA CGCGAGCGTC GGCGCCCCGC ACGACGAGGC GGTGGCCGGC
GAGGCTCGGG ACGGCGAGCC GGCGTCGGAC GTGCCGGTCC CGGCCACGAC CTGA
 
Protein sequence
MSGQTAENTE QGVPERTTRE KARILWAYAR PHKGVLAVAL VLGALGVAAE LATPLVTKAV 
LDGLEMSASL RTPITILAVL LVAGSVVGLI QGIMLGTLAE RIILAARTGI VRHLLGARVP
EVTARPPGEL VTRVTSDTLL IREATTSSVV NFVNGLIGLV GAIVLMAYLD VVLLGTTVAV
LVLVGICVVV LMPRLSKAQQ EAQEHVGKLG GRLEGVVRAL RTVKSARAET RETSRISAHA
EDSARAGIRA VKLENVSWTI TGAGVNLAVM LLLGVGAWRV STGAITVTTL VAFLLYVFQL
MMPVMLLTMA LTSLQSGLAA AARISDVEDM ELEADDDGAV ASRAQVTDRA GQVATGSAGA
SPPEPPALRL RDVTYRYQTA DGVAPALNGV SISVPRRGHT AIVGPSGAGK TTIMSLLLRF
LTPEDGRIEL DGRPYAEWTT DEIRSRIAYV EQDTPIVPGT LRENLAYAAP DASDARVWAA
VDALRLSARV ATMPDGLDTE VTSAELSGGE RQRVAVARAL VAQPEILLLD EATAQLDGLT
EAALAGAIRE VAATGAVVTI AHRLSTVVDA DQIVLLERGR VRAVGRHAEL LEADELYREL
VAALRLDASV GAPHDEAVAG EARDGEPASD VPVPATT