Gene Bcav_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3639 
Symbol 
ID7860981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4052422 
End bp4052808 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content73% 
IMG OID643867742 
Productanti-sigma-factor antagonist 
Protein accessionYP_002883643 
Protein GI229822117 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.828775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACCA CACCCCCGGG ACCCGTGTCG GGGTCGCAAC CCGGATCGGT GCGCGTGCGC 
ACGACCGACG ACCGCACCCG CATCGTGCTC GCCGGCGAGA TCGACGTCAG TCTCGCGGGC
GACCTCGCGG ACGCCGTCGG GCGCGCGGAG CTCGCGGGCA ACCCGACCGA GATCGACGCC
GCCCAGGTCG CCTTCATGGA CTCCTCGGGG ATCGCGCTCC TCGCGCGCGT CGCGACGCGG
ACCCCTGGTC GCCTGGCGAT CATCTCGCCG CCCGACGTCG TGCGGTTCCT GCTGGAGGTC
ACACGGATCG GCGACATGGT CGACGTGCTC GACATCGACC CGGGCTTCCC CGACTCCGAC
GGCGACGCCG GACCGTCCGT CGCCTGA
 
Protein sequence
MDTTPPGPVS GSQPGSVRVR TTDDRTRIVL AGEIDVSLAG DLADAVGRAE LAGNPTEIDA 
AQVAFMDSSG IALLARVATR TPGRLAIISP PDVVRFLLEV TRIGDMVDVL DIDPGFPDSD
GDAGPSVA