Gene Bcav_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3604 
Symbol 
ID7860868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4011121 
End bp4011642 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content71% 
IMG OID643867707 
Productprotein of unknown function DUF402 
Protein accessionYP_002883608 
Protein GI229822082 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3557] Uncharacterized domain/protein associated with RNAses G and E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0611051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATGG TGCGCGTGAG GTACACGAAG TACGACGGCG GTGCCCACTG GGCGCTCGAC 
GCGCGGCTCC TCGGCGAGGA CGATGCCGGT ACCTGGGTCT TCATGCCCCG TGGCACCGTG
CAGGTACGCC CGGGGGTGTC CTTCGAGGCT GCCGCGGACG CCGTCGGCCT GTTCCCCCAC
GACCAGCCGT GGGTCGCGTG GTTCTCCACC CCGGTCGATG CGCTGCGGCC GATCTCGCAC
CAGACCTACG TCGACGTGTC CACCGTCCCG GTGTGGACGG CGGACGGACG CGAGGTCACC
ATGGTCGACC TCGACCTGGA CGTCATCGCG CCGTTCGACG GCGAGCCCTT CGTCGACGAC
GAGGACGAGT TCGCGGAGCA CCGCGTCCGG TACGGGTATC CGGACGACGT CGTTGCCCTC
GCGGAGCGTT CCGCCGAGGA CGTGCTGGCC GCAGTCCGGA CCGGCGCCGA GCCGTTCGGC
TCGGCCTGGC GACCCTGGCT CGACGGCGCA CTCGCACGCT GA
 
Protein sequence
MTMVRVRYTK YDGGAHWALD ARLLGEDDAG TWVFMPRGTV QVRPGVSFEA AADAVGLFPH 
DQPWVAWFST PVDALRPISH QTYVDVSTVP VWTADGREVT MVDLDLDVIA PFDGEPFVDD
EDEFAEHRVR YGYPDDVVAL AERSAEDVLA AVRTGAEPFG SAWRPWLDGA LAR