Gene Bcav_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3515 
Symbol 
ID7858410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3906529 
End bp3907641 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content74% 
IMG OID643867618 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_002883519 
Protein GI229821993 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.315655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGG TCACCTACGC CGAGGCCGGC GTCGACACGG AGGCCGGCGA CAAGGCCGTC 
GAGCTCATGA AGGATGCCGT GCGGGCGACC CACGGACCCC AGGTGCTCGG GGGCGTCGGC
GGGTTCGCCG GGCTGTGGGA CGCGACGGAG CTGACGCGCT ACCGCCGGCC GCTGCTGGCG
ACGTCGACGG ACGGCGTCGG CACGAAGGTC GCCATCGCGC AGGCGCTCGA TGTGCACGAC
ACGATCGGTG CGGACCTGGT CGGCATGGTG GTCGACGACA TTGTCGTCGT CGGCGCGAAG
CCCCTCTACA TGACCGACTA CATCGCGTGC GGCAAGGTTG TGCCGGAGCG CATCGCGGAC
ATCGTGCGCG GCATCGCGGC GGCGTGCGAG GAGACGGGGA CGGCGCTCGT CGGCGGCGAG
ACGGCCGAGC ACCCCGGCCT GCTGGAGCCG GACGAGTACG ACGTCGCCGG GGCGGCCACG
GGTGTCGTCG AGGCCGACTC GCTGCTCGGC CCTGACCGCG TGCGCGCGGG CGACGTGCTC
GTGGCGATGG CGTCCAGCGG TCTGCACGCG AACGGCTACT CGCTCGTGCG CCGCGTGATC
GACGTCGCGG GCTGGTCGCT GCACACCCAC GTCGGGGAGT TCGGCCGGAC GCTCGGCGAG
GAGCTCCTCG TCCCGACCCG CCTGTACACC GCCCACTGCC TCGCGCTCGC CGACGCCGGC
GTCGTCCACG CGTTCTCTCA CGTCACCGGC GGCGGCCTCG CCGCGAACCT CGCCCGGATC
CTGCCCGGGG GCCTCGTGGC CGACGTCGAC CGCACCACCT GGGTCGTCCC GCCGATCTTC
GACGTCGTCC GCCGCGGCGG CGACGTGCCG TGGTCCGACC TCGAGGCCAC GCTCAACCTC
GGGGTGGGCA TGGTCGCCGT CGTCGCCCCG GAGGATCTCG ACGAGGCCCT GCGGGTGTGC
GCCGACCGCG GCGTGCAGGC CTGGGAGCTC GGCAGCGTTC GTGCGGAGGA CGACGGCGAC
GCCCCCGGCG CGGCCGCGTC GCCTCTCGTG CGGGGCACGA AGGGCGTGAC CGGCGGCGCG
GTGCGCCTGC ACGGGAGCTA CCGCACCGCC TGA
 
Protein sequence
MTRVTYAEAG VDTEAGDKAV ELMKDAVRAT HGPQVLGGVG GFAGLWDATE LTRYRRPLLA 
TSTDGVGTKV AIAQALDVHD TIGADLVGMV VDDIVVVGAK PLYMTDYIAC GKVVPERIAD
IVRGIAAACE ETGTALVGGE TAEHPGLLEP DEYDVAGAAT GVVEADSLLG PDRVRAGDVL
VAMASSGLHA NGYSLVRRVI DVAGWSLHTH VGEFGRTLGE ELLVPTRLYT AHCLALADAG
VVHAFSHVTG GGLAANLARI LPGGLVADVD RTTWVVPPIF DVVRRGGDVP WSDLEATLNL
GVGMVAVVAP EDLDEALRVC ADRGVQAWEL GSVRAEDDGD APGAAASPLV RGTKGVTGGA
VRLHGSYRTA