| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3449 |
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| Symbol | |
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| ID | 7859223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3850445 |
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| End bp | 3851992 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643867549 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002883453 |
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| Protein GI | 229821927 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.802426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCC GTAGGCGCCG GCCGCTGATC GCGGCTGCAG CCACGCTGAC GTTGATGACG
TCGATCGCCG CGTGCTCGCT CGGTGGGTCG ACCGACGGCT CCGGTGACAC CACCGGGGAC
GAGACGGGCG ACGGCGGCGG TGGCGACCTC GTCGTCGCCG GCCCGATCCC CATCGAGAAC
CTCGACCCGC ACGGCGCGGC CAGCATGGAC GCCGGCACCC AGCTCGCTGC GCGGGCGATC
TTCAGCCAGC TGCTCGTGAG CACCGGGCAG GGCGAGTTCG ACGGCGAGCT GGCCGAGTCG
TGGGAGTCGA ACGACGACGC GAGCGTGTGG ACGTTCGCGC TGCGCGCCGG CGTCACGTAC
TCCGACGGCT CGCCGGTGAC GGCGGACGAC GTCGTCGCCT CGTTCGAGCG GGTCCTCGCC
GCCGAGGGTC CGCTCGCCGG GAACTTCGGC GGGTACACGG TCGCCGCCCC CGACGACGCG
ACGGTCGTCT TCACGTCGCC GACGCCGGAC GCCGCGTTCC TGGGCAAGAT CTCGTCGTTC
TTCGTGACGC CCGCCGGCGC GGCGGAGGAC GGCTTCTTCT CCGACCCGGT CGGCTCCGGC
CCGTTCCTCG TGGAGTCCTT CGAGCCGGGC GCCACGCTGC GTCTGAGCCC GAACCCGGAC
TACTGGGACG GCGAGCCGGA GATCGCCTCG CTGGAGCTCC AGTCGATCCC GGAGACGGCG
GCGCGGATGA CGGCGCTCCA GACTGGCGAG GTCGACATCA CCTGGAGCAT GCCCGACGAC
CAGATCGCCG AGCTCCGCAC GAACGCGGAG CTCACCGTCG AGACGGTGCC GAGCCCGGGC
GTGTTCACGA TGTGGTTCAA CAGCTCGACG CCGGCGCTCG AGGACCCGGC GGTGCGGCGC
GCGCTCTGGC AGGCCGTCGA CTTCGAGGAG ATCATCGCCT CGCTCTACCC GGAGACCGGG
ACGCCGGCCG ACGCGCCGGT CTCTCCCACG GTCCTGGGCT ACGCCCCGCA GGAGCCGGTC
GCGTACGACC CGGACGCCGC CCGGGCCGCG CTGGAGGCCG CGGGCTTCGA CTTTGAGAAC
ACCGTCCTGC GGTGGCAGTT CTCGCAGGCC AGCTTCCGCA ACTTCATGAA CGCCGTCGTC
TCCGACCTGG CGGAGATCGG CGTCACCGTC GAGCCGCTGG AGAAGGAGCA GGCGGTCTTC
CTCGAGGACC TGCTGGCGCT GAACTGGGAC ATGAACATGC AGCAGCTCGG GTCGCAGGGG
TACGACGCGG CGACCAACCT CGGCCGCCTC TACACGTGCG AGGCGAACCG GATGGGCTAC
TGCAACCCCG AGCTCGACGA CCTCCTCGCG GCGGCCGGGT CGACCAGCGA CACCGCCGAG
CGGGAGGACC TGTACGCGCA GGCCACGGAG ATCATCTGGA ACGACGCCGT CGGGATGTAC
CCGATGTTCG TCGAGACGCC GTACGCGTGG CAGAACCGGG TCGAGGGATT CACGCCCGTG
TCCGACGGGA TCCCCTACTT CGACGAGGTC ACGGTCTCGG GTGACTGA
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| Protein sequence | MTLRRRRPLI AAAATLTLMT SIAACSLGGS TDGSGDTTGD ETGDGGGGDL VVAGPIPIEN
LDPHGAASMD AGTQLAARAI FSQLLVSTGQ GEFDGELAES WESNDDASVW TFALRAGVTY
SDGSPVTADD VVASFERVLA AEGPLAGNFG GYTVAAPDDA TVVFTSPTPD AAFLGKISSF
FVTPAGAAED GFFSDPVGSG PFLVESFEPG ATLRLSPNPD YWDGEPEIAS LELQSIPETA
ARMTALQTGE VDITWSMPDD QIAELRTNAE LTVETVPSPG VFTMWFNSST PALEDPAVRR
ALWQAVDFEE IIASLYPETG TPADAPVSPT VLGYAPQEPV AYDPDAARAA LEAAGFDFEN
TVLRWQFSQA SFRNFMNAVV SDLAEIGVTV EPLEKEQAVF LEDLLALNWD MNMQQLGSQG
YDAATNLGRL YTCEANRMGY CNPELDDLLA AAGSTSDTAE REDLYAQATE IIWNDAVGMY
PMFVETPYAW QNRVEGFTPV SDGIPYFDEV TVSGD
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