Gene Bcav_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3440 
Symbol 
ID7859213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3838590 
End bp3839417 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content77% 
IMG OID643867539 
ProductABC transporter related 
Protein accessionYP_002883444 
Protein GI229821918 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.358394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCA CCGCCGCCCC GCCCGTGCGC GGCACGGCGC TGCCCGTGCG GCTCCGCGAC 
GTCGGCCGCA CGTTCGCGAC ACCCACCGGG CCACGCCCCG TGCTCGCGGC CGTCGACCTC
GAGGTCGGCC CCGGCGAGAT CGTGGCGATC CTCGGCGCCT CGGGCTGCGG CAAGTCCACG
CTCCTGCGCC AGGTGGGCGG CCTCGACAGC CCCGACGCCG GCGCCGTCGT CATCGACGCC
GCACCGGTGC GCGGCTACGA CCCCCGCACG GCCGTCGCGT TCCAGGAACC GCGCCTCCTG
CCCTGGCGCA CGCTCGAGCA GAACGTGGCC GTGGGCCTGC CGCGCGGGAT CGACCGGGCG
GCGGGCCGCC GTCGGGTCGC CGAGCTGCTC GCGCTCGTCG ACCTGGACGC CTCCGCGACG
CTGCGCCCGC GCCAGGTCTC CGGCGGGATG GCGCAACGGA CGTCGCTCGC CCGCGCCCTC
GCGCGGGACC CCGGGGTGCT CCTCCTCGAC GAGCCGTTCG GCGCCCTCGA CGCCCTCACG
CGACTGCGGA TGCAGGACCT CCTCCTCGAC GTCCACGCCG CCCAGCCCAC GACGATCCTG
CTCGTCACGC ACGACGTCGA GGAGGCCCTG TACCTCGCGG ATCGCGTGGT GCTCCTCGGG
GCGCTCGACG GCGCAGCCCC CGCGGGTGCC TCGGTGCGGT CGGTCGTCCC CGTCCGTGCC
CCACGCCCCC GTGACCGCGC GGACTCCACC CTCGCCGAGC TCCGGGTCGA CCTGCTCGCC
CGGCTCGGCG TCGACAGCCA CCACACCCCG ACCCAGGAGA ACCGATGA
 
Protein sequence
MALTAAPPVR GTALPVRLRD VGRTFATPTG PRPVLAAVDL EVGPGEIVAI LGASGCGKST 
LLRQVGGLDS PDAGAVVIDA APVRGYDPRT AVAFQEPRLL PWRTLEQNVA VGLPRGIDRA
AGRRRVAELL ALVDLDASAT LRPRQVSGGM AQRTSLARAL ARDPGVLLLD EPFGALDALT
RLRMQDLLLD VHAAQPTTIL LVTHDVEEAL YLADRVVLLG ALDGAAPAGA SVRSVVPVRA
PRPRDRADST LAELRVDLLA RLGVDSHHTP TQENR