| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3356 |
|---|
| Symbol | |
|---|
| ID | 7860322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3730404 |
|---|
| End bp | 3731429 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643867456 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002883361 |
|---|
| Protein GI | 229821835 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.647155 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCCTG CCCGGACGCC GCCCGGCGAC GGCGGCCCCC GCGTGACGAT CCGCACCGTC
GCGGCCGCGG CCGGCGTCTC GACGTCGACC GTCTCCCGCG TCTTCTCCCA CCCGCACCTC
CTGCGGGCGA GCACCGTGGA ACGCATCACC GCCCTCGCGG CCGAGCTGGG TTACGTTCCC
CACCACGCCG CCCGCGCGCT CAGCACCGGC CGCCTCGGCA CGATCGGCGT CGTCGTCCCG
GACATCGCCA ACCCGTTCTT CCCGCCCGTC ATCCGCGCCG CGCAGGCCCG CGCCGCGGAC
GACGGCGTCA GCACCCTGCT CGCGGACACG GACGAGAGTG CCGAGCGCGA GGCGGACCTG
CTGCGCACCC TGTCCTGGCG CACGGACGGC GTCGTGCTCG TCTCCTCCCG ACTGCCGGAC
GACGACGTGC GCGCCCTCGC TGCGCGACGC CATGTGGTGC TCGTGAACCG GGACGTCGAC
GGCGTCACGC GCGTGCTGCT CGACACCGCC GTCGGGATGG CGCAGGCCGT GGACCACCTC
GCGGACCGCG GCCACCGGCG ACTCGCCTAC GTGGGCGGTC CGGCGCCGTC GTGGTCGGAC
GACACCCGGC GCGCCGCGGT GCTCGCGCGC GCGGCGGAGC GGTCCGTCGA TGTCGTCGAC
CTCGGCGCGC ACCGGCCGGA GCACGACGTC GGCCTCGCCC TCGCGCCCGC TCTGGTGGCC
TCCGGGGCGA CGGCGGCGAT CGCGTTCGAC GACGTGCTCG CGCAGGGCGT GCTCGCCGGC
CTGCTCGCGG CGGGCGTCGA CGTCCCCGGC GACGTGTCGG TCGTCGGCTG CGACGACATC
CTTGCGGTGC GGACGGTGCC GCCGCTCACC ACGATCCACG GCCCGAGCGA CGAGGCCGGC
GCCGTCGCCG TCGAGCTGCT GCTCCGCCTC GTCCACCGCG AACCCGGCAC GGGCTCGGCT
GAGCGGGTGG TCCTCCCGGC GGAGCTCGTG GTCCGTTCCA CCACGGGGCC CGCGCCGCGC
TGCTGA
|
|---|
| Protein sequence | MSPARTPPGD GGPRVTIRTV AAAAGVSTST VSRVFSHPHL LRASTVERIT ALAAELGYVP
HHAARALSTG RLGTIGVVVP DIANPFFPPV IRAAQARAAD DGVSTLLADT DESAEREADL
LRTLSWRTDG VVLVSSRLPD DDVRALAARR HVVLVNRDVD GVTRVLLDTA VGMAQAVDHL
ADRGHRRLAY VGGPAPSWSD DTRRAAVLAR AAERSVDVVD LGAHRPEHDV GLALAPALVA
SGATAAIAFD DVLAQGVLAG LLAAGVDVPG DVSVVGCDDI LAVRTVPPLT TIHGPSDEAG
AVAVELLLRL VHREPGTGSA ERVVLPAELV VRSTTGPAPR C
|
|---|
| |