Gene Bcav_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3253 
Symbol 
ID7861725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3610492 
End bp3611286 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content73% 
IMG OID643867353 
Productcytochrome c biogenesis protein transmembrane region 
Protein accessionYP_002883258 
Protein GI229821732 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0400175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.222904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCG GCGGTGTGGC GGCGGCGTTC GAGCGGACGA TCCTCTCGGG CTCCCTGCTC 
GCGGCGCTGC CGGTCGCCCT CATCGCCGGC TTCGTGTCGT TCGCGTCGCC GTGCGTGCTG
CCGCTCGTGC CCGGGTACCT CGGATACGTC GGCGGGATGA CCGGGATCGA CCTGGGCGCT
GCGCAGACGC GCGGCAGCTC GGGCGTCGGC CCCGCGTCCC GTGGCCGACT GCTCGCGGGC
GTGCTGATGT TCGTCGCGGG GTTCAGCGCC GTGTTCGTCG CCCTGAGCCT CGTCTTCGTG
CAGATCGGGG CGTCGGTGCA GCCGTGGATG GACGTCGTGC TGCGCGTGCT GGGTGTCGTC
GTCATCCTGC TCGGCCTCGC GTTCATGGGG TTCGTGCCGT TCCTGCAGCG CGAGCGCCGT
CTGCACGTCA GCCCCCGCGC CGGGCTCTGG GGCGCGCCGC TGCTCGGCGT CGTGTTCGGG
CTCGGCTGGG CGCCGTGCAT CGGGCCGACC CTCGGCGCCA TCACGATCCT CGCGCTGCCC
ACCGGTGAGC CGGCGCGCGG CGCGGTGCTC GCGCTCGCGT ACTGCCTCGG GCTCGGGCTG
CCGTTCGTGC TCATCGCCCT CGCGTTCCGT CGCTCCGCCG GCGCGCTCGG CTTCCTCCGC
CGGCACCGCC TGGCGATCAT GCGGATCGGC GGCGGCCTGC TCATCCTGCT CGGGATCGCC
CTCGTGTCCG GTCTGTGGAT GCAGTGGTCG CAGTACCTGC AGGGGCTCGT CGACGGATTC
GAGACGGTGG TCTGA
 
Protein sequence
MDLGGVAAAF ERTILSGSLL AALPVALIAG FVSFASPCVL PLVPGYLGYV GGMTGIDLGA 
AQTRGSSGVG PASRGRLLAG VLMFVAGFSA VFVALSLVFV QIGASVQPWM DVVLRVLGVV
VILLGLAFMG FVPFLQRERR LHVSPRAGLW GAPLLGVVFG LGWAPCIGPT LGAITILALP
TGEPARGAVL ALAYCLGLGL PFVLIALAFR RSAGALGFLR RHRLAIMRIG GGLLILLGIA
LVSGLWMQWS QYLQGLVDGF ETVV