| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3241 |
|---|
| Symbol | |
|---|
| ID | 7861713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3600924 |
|---|
| End bp | 3601484 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 643867342 |
|---|
| Product | putative regulator |
|---|
| Protein accession | YP_002883247 |
|---|
| Protein GI | 229821721 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0950975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACCG CGAAGGGCGA GCGCCGGCGG GCCGCGCTCG TCGCGGCGGC CACGGAGCTC
GTCCTCGCGG GCGCCCCGGT CAGTCATCGA GCGGTCGCGG AGGCCGCGGG CTCGTCGCTG
TCCGCGACCA CCTACTACTT CGCCGACCTC GACGCGATCC TCGCTGCCGC CGGGGCCCGG
ATCGCCGCCG GCTGGGTCGA GCGTGCCGAG CGGGTCGCCG ATGGCGTGGT GGCGGAGCGC
GACGGCGACG CGCGGCCGGC CCGTGAGGGC CACGTCGTCG AGGCGCTTCT CGACGCGATC
CTCCCGGCGG ACGGCGAGAT CGCCGGGCAC TACGCGCACC TGGTCGCGGC CGCGTCGATG
CCCGCCCTGG CGCGGGCGTA CGCCGAGCAC CGACCGGCGA TCGACGCCGC GGTCACCAGG
ATCCTCGGCG CGGGGGCGGT GAGCCTCGAC GCCGACGTGG CGGTCGCCGT CGTCGACGGC
GCGGTGATCA GCGCGCTGAG CGAGGGATCC GACCCGCGCA CGCGGGCCCG GGAGCTGGTG
CGGCGGGAGC TTCGCCGCTG A
|
|---|
| Protein sequence | MVTAKGERRR AALVAAATEL VLAGAPVSHR AVAEAAGSSL SATTYYFADL DAILAAAGAR
IAAGWVERAE RVADGVVAER DGDARPAREG HVVEALLDAI LPADGEIAGH YAHLVAAASM
PALARAYAEH RPAIDAAVTR ILGAGAVSLD ADVAVAVVDG AVISALSEGS DPRTRARELV
RRELRR
|
|---|
| |