Gene Bcav_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3195 
Symbol 
ID7857952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3548582 
End bp3549964 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content73% 
IMG OID643867296 
ProductFerredoxin--NADP(+) reductase 
Protein accessionYP_002883201 
Protein GI229821675 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.221459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.272173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCCC ACCCCGCCCA CGTCGCGATC GTCGGTGCCG GCCCTGCCGG CATCTACGCC 
GCCGACATCC TGTCCCGCTC CGTCCCCGGC GCCCGGATCG ACCTGTTCGA ACGGCTTCCG
GCGCCGTTCG GGCTGGTGCG CTACGGCGTC GCACCCGATC ATCCGCGGAT CAAGCAGATC
ATCGTGGCGC TGCACAAGGT GCTCGCCCGC GGCGACATCC GGCTCATCGG GAACGTGGAC
TACGGCGTCG ACCTCAAGCT CGAGCACCTC CGCGAGCACT ACGACGCCGT GATCTTCGCC
ACCGGCGCGA TCCGGGACGC CCCGCTCGCG CTGCCCGGCG CGGACCTGCC CGGCAGCTAC
GGCGCGGCCG ACTTCGTCTC CTGGTACGAC GGGCACCCGG ACTTCCCGCG GACGTGGCCG
CTCGAGGCCG AGCAGATCGC CGTGCTCGGC GCGGGCAACG TCGCGCTCGA CGTCGCGCGG
ATCCTCGCGA AGCACCCGAA GGACCTGCTG CCGACCGAGG TGCCGGCGAA CGTCGTCGCC
GGTCTCGAGG CGTCGCCGGT GACGGACGTC CATGTCTTCG GCCGGCGCGG GCCGGCCCAG
GCCAAGTTCA CGCCGCTCGA GCTGCGCGAG CTGGGCCACG TGCCCGACGT CGACATCGTG
GTGTACCCCG AGGACTTCGC TTTCGACGAG GGGTCCGAGG AGGCGATGCG GACGAGCAAC
CAGACCAAGC AGGTCGTCAA GACGCTCACG GACTGGGCGC TGCGCGATCC GAGCGAGCTC
ACGGCGTCAC GCCGCATCCA CCTGCACTTC CTGCACCGGC CTGTCGAGAT CCTCGGCACG
GACCGGGTCA CCGGGCTGCG CACGGAGCGC ACCGAGCTCG TCGGCGACGG CACCGCGCGG
GGGACCGGCC GCTTCGCCGA CACCCCGGTC CAGGCCGTCT ACCGCGCCGT CGGGTACTTC
GGCTCGCCGC TCGTGGACAT CCCGTTCGAC GACGTGGCCG GGGTCATCCC GAACGAGGGC
GGCCGCGTGC TCGACCTCGA CGGCCGGCAC ATCCCCGGCG TCTACACGAC CGGCTGGATC
AAGCGCGGCC CGGTGGGTCT CATCGGCCAC ACGAAGTCCG ACGCGAGCGA GACCATCCGC
CACCTGGCGG CCGACCTCGA GGGCGGTTCG GGCCTGCGCG ACGGCGTCCC GGGCGCCGCC
GAGGACGCTG ACGGCGAGGC GCTGCTCTCG AACCTGGCCG ACGCGGGCGT CCGCTACACG
ACCTGGCAGG GCTGGGAGCT GCTCGACGCG TACGAGCGGT CGCTCGGCGC TGCCGAGGGC
CGGGAGCGCA TCAAGGTCGT GCCGCGCGAG GAGATGACCG CGGTGTCCTT CGGGGAAGCC
TGA
 
Protein sequence
MSSHPAHVAI VGAGPAGIYA ADILSRSVPG ARIDLFERLP APFGLVRYGV APDHPRIKQI 
IVALHKVLAR GDIRLIGNVD YGVDLKLEHL REHYDAVIFA TGAIRDAPLA LPGADLPGSY
GAADFVSWYD GHPDFPRTWP LEAEQIAVLG AGNVALDVAR ILAKHPKDLL PTEVPANVVA
GLEASPVTDV HVFGRRGPAQ AKFTPLELRE LGHVPDVDIV VYPEDFAFDE GSEEAMRTSN
QTKQVVKTLT DWALRDPSEL TASRRIHLHF LHRPVEILGT DRVTGLRTER TELVGDGTAR
GTGRFADTPV QAVYRAVGYF GSPLVDIPFD DVAGVIPNEG GRVLDLDGRH IPGVYTTGWI
KRGPVGLIGH TKSDASETIR HLAADLEGGS GLRDGVPGAA EDADGEALLS NLADAGVRYT
TWQGWELLDA YERSLGAAEG RERIKVVPRE EMTAVSFGEA