Gene Bcav_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3087 
Symbol 
ID7858547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3442372 
End bp3443550 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content76% 
IMG OID643867184 
Producthistidine kinase 
Protein accessionYP_002883093 
Protein GI229821567 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0770082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.56822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCCG CCGACGTCCT CATCGTCGCC GCCGCCGTCG CCGGGAGCGC CGTCGCCACC 
GCCCTCCTCG CCCTGCTCGC CCTCCGCCCG ACGCGCCGAG CGCCGCTCGC CTGGCGGATC
ACGCTCGCCG CCGTCGCCGC CGTCGTCTCG ACGGCCATCG GCGTCGTCGC CATCGCGCAG
GCGATGTTCA TCTCGCCGCA CGACCTGGCC GTCGTGCTCG CCACCGTCGG CCTCGGCGCG
CTCGGCGGCG CCGTCGTCGC CTGGGTCCTC GGCAGCCGCG TGGCACGGGA AGCGCGCGAC
GTCGCCCGGC TGGCGCACCG GCTCGGCGAG GGCGAGGTGC TCGACGGCGC CACGAACGAG
AGCGCCGACG TCGCCACGAG CGCGGAGCTG CGCGTGGTCG CCGCCGAACT GATCGCGGCG
AGCGAGCGGC TCGAGGAGGC GCGACGCGCG GGCGAGCGGC TCGAGTCCGC CCGTCGCCAG
GTCGTGTCCT GGGTCTCGCA CGACCTGCGC ACCCCGCTCG CCGGCCTGCG CGCCATGGCG
GAGGCCCTGG AGGACGGGAT CGTCGACGAC CCCCGCCCGT ACTACGCCCG CATCCAGCAG
CAGGTGGCGG CCATGTCGGC GCTGGTCGAC GACCTGCTCG CGTTCTCCAC GATCCAAGCC
GGCACGCTGC GACTCGCGCT CGAGGACGTC GCCCTCGGCG ACCTCATCAG CGACACCCTG
GCCGAGGTCT CCCCGCTCGC GGCGGCCGGC GGCGTCCGTG TCGACGGCAG CTCGGCCGAC
GCCGTCACCG TCCTCGGCGA CGCACGCGAG CTCTCGCGTG TCCTGCGCAA CCTCGTGACG
AACGCGATCC GCTTCACCCC GCCGGACGGG ACGGTCGAGA TCTCCGCATT CGTCGCCGGC
TCCCACGCCG TGGTCCGGGT GACGGACGCC TGCGGCGGCA TCGCCGACGA CGACGTCCCG
CGACTGTTCG AACCCGGCTG GCGGGGCGAT GCCGCCCGCA CCCCGTCGAC GGCCGTGCGC
GGGGGCGCCG GCCTGGGCCT GAGCATCGTG CAGGGCATCG TCGAGTCCCA CAGCGGGACG
GTCGTGGCGC GCAACGTGGA CGGGGGCTGC TGCTTCGAGG TCCGGCTGCC GGTGGCCGAG
GCCGGGACGT CCGGACGTCG ACGCGCGCCC GCGACCTGA
 
Protein sequence
MRPADVLIVA AAVAGSAVAT ALLALLALRP TRRAPLAWRI TLAAVAAVVS TAIGVVAIAQ 
AMFISPHDLA VVLATVGLGA LGGAVVAWVL GSRVAREARD VARLAHRLGE GEVLDGATNE
SADVATSAEL RVVAAELIAA SERLEEARRA GERLESARRQ VVSWVSHDLR TPLAGLRAMA
EALEDGIVDD PRPYYARIQQ QVAAMSALVD DLLAFSTIQA GTLRLALEDV ALGDLISDTL
AEVSPLAAAG GVRVDGSSAD AVTVLGDARE LSRVLRNLVT NAIRFTPPDG TVEISAFVAG
SHAVVRVTDA CGGIADDDVP RLFEPGWRGD AARTPSTAVR GGAGLGLSIV QGIVESHSGT
VVARNVDGGC CFEVRLPVAE AGTSGRRRAP AT