| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3026 |
|---|
| Symbol | |
|---|
| ID | 7860137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3374211 |
|---|
| End bp | 3376700 |
|---|
| Gene Length | 2490 bp |
|---|
| Protein Length | 829 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643867123 |
|---|
| Product | ATP-dependent DNA helicase PcrA |
|---|
| Protein accession | YP_002883032 |
|---|
| Protein GI | 229821506 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.499575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000248027 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC TCTTCGACAA CCTCCCGCTC ACCGGCGCTC TCGCCGCCGA CACCGCGACG
GCGCACAGCG CCGTGACGGC CGACGGCGCG CGCCTCCCGG GCCTCGTCCC GCCCCGGGAA
GACGCACAAC CCGAGCCCGT CCGCGGCGGC CGCGGCCGCG ACGCCGAGGC GCTGCTCGAG
GGGCTGAACC CGCACCAGCG GGCGGCTGTC GTGCACTCCG GCCCTCCGCT GCTCATCATC
GCCGGTGCCG GCTCGGGCAA GACGCGTGTG CTCACGCACC GCATCGCGTA CCTGCTGGCG
ACGCGGCGCG CGCGCCCGGG CGAGATCCTC GCGATCACGT TCACGAACAA GGCGGCGGCC
GAGATGCGCG AGCGGGTGGA GGCGCTCGTG GGTCCACCGG CCCGCGCGAT GTGGGTGTCG
ACGTTCCACT CCGCCTGCGT GCGCATCCTG CGCCGCGAGC ACGCGGTGCT CGGCCTCCGG
TCGAGCTTCT CCATCTACGA CGCCGCCGAC TCCCTGCGTC TCATGACCCT CGTGTGCCGC
GAGCTGGGTC TGGACCCGAA GCGGTACCCG CCCAAGGCCT TCATCCACCG CGTCTCCGAC
CTGAAGAACG AGCTCGTGGA CCCGGACGCG TTCGCGGCGG GCGTGGGTGG CTCGAACCCG
TACGAGGAGA ACCTCGCCGA GGCCTACCGG ATGTACGCGC AGCGGCTGCG GCAGGCGAAC
GCGCTGGACT TCGACGACCT CATCATGACC ACGGTGAACC TGCTCCAGGC GTTCCCGGCC
GTCGCGGAGC ACTATCGCCG CAGGTTCCGC CACGTGCTCG TGGACGAGTA CCAGGACACC
AACCACGCGC AGTACGTCCT GGTGCGCGAG CTCGCGGGCG TCGCCACGCA GGCGTACGAC
GACGGCGGCG ACTCCGACCT CGACCGTGGC CCGGCGCCCG TGCTCCCCGC GGAGCTGACC
GTCGTCGGCG ACGCCGACCA GTCCATCTAC GCGTTCCGCG GCGCCACGAT CCGCAACATC
CTCGAGTTCG AGGCCGACTA CCCGGACGCG ACGACGATCC TGCTCGAGCA GAACTACCGC
TCGACGCAGA ACATCCTCTC CGCGGCGAAC GCCGTCATCG CCCGCAACCC CGACCGCAAG
GCCAAGAACC TGTGGACGGC GGCCGGCGCC GGGCCGAAGA TCATCGGCTA CGTCGCCGAC
TCCGACCACG AGGAGGCGCG CTTCGTCGCC GAGGAGATCG ACCGGCTCGG CGACGCGAGC
GGCGTCCGGC CGGGCGACGT CGCCGTCTTC TACCGCACGA ACGCGCAGTC GCGGGCGCTG
GAGGAGGTCC TGATCCGCGC CGGCATCCCG TACAAGGTGG TCGGCGGCAC GCGGTTCTAC
GAACGGCGTG AGGTCAAGGA CGCGATCGCC TACCTGAGGG CCATCGCGAA CCCGGACGAC
GCCGTCAACG TCCGCCGCAT CCTCAACGTG CCCAAGCGCG GCCTGGGGGA GCGCAGCGAG
GCCGTCATCG CCGCGTACGC GGAGCGGGAG CGGATCTCCT TCGGCGCGGC GCTCGAGGCG
GCCGCCGACG TGCCCGGCCT GGCGACGCGC GCTCTCGGCA TCGTCACGGA GTTCGCGCGG
CTGCTGGCCG ACCTCCGTGC GATGGCCGCC GGCGGTGCCA CGCCCGCCGA GGTGCTGGAC
TCCGCGCTCG ACCGGTCGGG ATACCTCGCC GAGCTGCGCG CGAGCGACGA CCCGCAGGAC
GCCACGCGTG TCGAGAACCT GGCCGAGCTG CACGCGGTGG CGGCCGAGTT CTCCGAGGCC
GACCCGGACG GCGACCTCGG CGACTTCCTC GAGCGCGTGG CGCTCGTCGC AGACACCGAC
CAGCTCCCGG ACGACGACGC GTCGGGCGGC GTCGTCACGC TCATGACGGT CCACACGGCG
AAGGGTCTGG AGTTCCCCGT CGTGTTCGTG ACCGGGCTGG AGGACGGCAC GTTCCCGCAC
GCCCGGTCGC TGGCCGACCC GGCGGAGCTC AGCGAGGAGC GCCGTCTGGC CTACGTCGCC
CTGACCCGCG CCCGGGAGCG CTTGTACATC TCGCGTGCCG CCGTGCGTAC AGCGTTCGGC
GTACCGCACG AGCTGCCGGC GTCCCGGTTC CTCGACGACA TCCCGGACGA GCTCCTGGAC
TGGCGGCGGG CGGAGTCGAG CATGCAGCAG CTCCGCGGGT CGTGGGGGAG CGGCGGCGTC
GGGTCCGGCC GAGTCCGGTC GGGCGCCACC GGAGGGACGG GGCCGCGCAC CGCGCCGAGC
CAGGCCACAG GGGCGACGTT CGGGTCCGCG ACGCCGCGCG CGGACGTGCC GAGCCTCGAC
GTCGGCGACC GGGTGACGCA CGACGCCTAC GGCCTCGGCA CGGTCGTCGC GCTCGAGGGC
GCCGGGTCGA GCCAGGTCGC GAAGATCGAC TTCGGGACGG ACGGCGTGAA GCGCCTCCTG
CTGCGCTACT CGCCGGTCAC CAAGCTCTGA
|
|---|
| Protein sequence | MTSLFDNLPL TGALAADTAT AHSAVTADGA RLPGLVPPRE DAQPEPVRGG RGRDAEALLE
GLNPHQRAAV VHSGPPLLII AGAGSGKTRV LTHRIAYLLA TRRARPGEIL AITFTNKAAA
EMRERVEALV GPPARAMWVS TFHSACVRIL RREHAVLGLR SSFSIYDAAD SLRLMTLVCR
ELGLDPKRYP PKAFIHRVSD LKNELVDPDA FAAGVGGSNP YEENLAEAYR MYAQRLRQAN
ALDFDDLIMT TVNLLQAFPA VAEHYRRRFR HVLVDEYQDT NHAQYVLVRE LAGVATQAYD
DGGDSDLDRG PAPVLPAELT VVGDADQSIY AFRGATIRNI LEFEADYPDA TTILLEQNYR
STQNILSAAN AVIARNPDRK AKNLWTAAGA GPKIIGYVAD SDHEEARFVA EEIDRLGDAS
GVRPGDVAVF YRTNAQSRAL EEVLIRAGIP YKVVGGTRFY ERREVKDAIA YLRAIANPDD
AVNVRRILNV PKRGLGERSE AVIAAYAERE RISFGAALEA AADVPGLATR ALGIVTEFAR
LLADLRAMAA GGATPAEVLD SALDRSGYLA ELRASDDPQD ATRVENLAEL HAVAAEFSEA
DPDGDLGDFL ERVALVADTD QLPDDDASGG VVTLMTVHTA KGLEFPVVFV TGLEDGTFPH
ARSLADPAEL SEERRLAYVA LTRARERLYI SRAAVRTAFG VPHELPASRF LDDIPDELLD
WRRAESSMQQ LRGSWGSGGV GSGRVRSGAT GGTGPRTAPS QATGATFGSA TPRADVPSLD
VGDRVTHDAY GLGTVVALEG AGSSQVAKID FGTDGVKRLL LRYSPVTKL
|
|---|
| |