Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2964 |
Symbol | |
ID | 7860075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3307553 |
End bp | 3308800 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867062 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002882971 |
Protein GI | 229821445 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0036613 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCACGC CGTCGGCCAA GCCCGACCGC CGGGGCCACT TCGGGGTGCG CGACCTCATG ACGGAGGCGA CGCACGGGAT CGGCGCTCGC CCCGGGCGGC TCTTCCTCAC GATCCTCGGG ACCGTGCTCG GCATCTGCGC GCTCGTCGTG ACGATGGGGA TGGCGCAGAC GGGCGCCGGC CAGATCGCCC GCCAGTTCGA CGCCGTCGCC GCGACGCAGG TCGTGGTGGA GCCCGCCTCG ACCACGACCA TGGGCGGCGA GCAGCGGGCC CGCGCGCAGC TGCCCTGGGA CTCCCCCGAG CGCGTCGCGC GCCTCGCCGG CGTCGAGGCG GCGGCCCTCC TGGCGGACGT GGACACGGGC GGGGCGCAGG TCACCGCCGT GCCGGTCACG GACCCGACGG CGCCGCGCGT CGCCTCTCCC CCCGTCGTGG CGGCGTCGGC CGACCTGCTC CCCGCGGTGC GGGGCAATCT CGGCACGGGG CGGTTCTTCG ACGCCGGACA CGACGCGCGC GCCGATCGCG TCGTCGTCCT CGGGGCGGCG GCCGCGGAGC GGCTCGGCGT CAACCGGGTG GACTCGCAGC CGTCGATCTT CATCGGCTCG CGTTCCTACA CGGTCATCGG GATCCTCGAG GACGTCGCCC GCCGGCGTGA CCTCGTCGAC GCGGTGATCC TCCCGCTCGG CACGGCGCGC GCGGACTTCG GCCTCACCGC GCCGAAGGAG CTCCAGATCC GGATCACCGT CGGAGCGGGG TCGGTGGTCG CGCGGCAGGC GCCGATCGCG CTCGCGCCGA ACACACCCGA GAACATCGAG GTCCAGGCGC CGGCGTCGGG CGGAGGGCTG CAGGAGAACG TGCAGGCCGA CGTCAACGCG ATCTTCCTCG CGCTCGGCGG CTTGGCGCTC CTCGTCGGCG GGCTCGGCAT CGCGAACGTC ACGCTGCTGT CGGTGATGGA GCGCGTCGGT GAGATCGGGC TGCGGCGGGC GCTGGGCGCC ACGCGTCGGC AGATCGCCGC GCAGTTCATC GTCGAGTCGG TGGTGATCGG GCTGCTCGGC GGCCTCATCG GCGCCGCGCT GGGCGTGTTC GCCGTCGTCG GCGTGAGCGC CCTGCAGAGG TGGACGCCGA TCCTCGACCT GCGGATGGCG CTCGGCTCGG CGCTCCTCGG CGGGCTCATC GGCCTGGTCG CCGGCGCCTA TCCGGCGATC AAGGCGGCGT CGCTCGAACC GGTGGCGGCG CTCCGGGGTG GCCTGTAG
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Protein sequence | MSTPSAKPDR RGHFGVRDLM TEATHGIGAR PGRLFLTILG TVLGICALVV TMGMAQTGAG QIARQFDAVA ATQVVVEPAS TTTMGGEQRA RAQLPWDSPE RVARLAGVEA AALLADVDTG GAQVTAVPVT DPTAPRVASP PVVAASADLL PAVRGNLGTG RFFDAGHDAR ADRVVVLGAA AAERLGVNRV DSQPSIFIGS RSYTVIGILE DVARRRDLVD AVILPLGTAR ADFGLTAPKE LQIRITVGAG SVVARQAPIA LAPNTPENIE VQAPASGGGL QENVQADVNA IFLALGGLAL LVGGLGIANV TLLSVMERVG EIGLRRALGA TRRQIAAQFI VESVVIGLLG GLIGAALGVF AVVGVSALQR WTPILDLRMA LGSALLGGLI GLVAGAYPAI KAASLEPVAA LRGGL
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