| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2897 |
|---|
| Symbol | |
|---|
| ID | 7860429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3233638 |
|---|
| End bp | 3235692 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866995 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_002882904 |
|---|
| Protein GI | 229821378 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0777832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0384863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGACTG TGCCGGTGAC CGACGCCAGG ATGCTCCTCG ATGCGCTCGA CGACGACCAG
CGCGCCGTCG CGTCCTCCCT CACCGGCCCG TTGTGCGTGC TGGCCGGTGC CGGCACCGGC
AAGACCCGCG CCATCACGTA CCGGATCGCG CACGGCGTGC AGGCCGGAGC GTTCGAGGCC
TCGCGGGTGC TGGCCGTGAC GTTCACGGCG CGCGCCGCGG GGGAGATGCG GTCGCGGCTG
CGGGACCTCG GTGTGGGCGG TGTGCAGGCG CGCACGTTCC ACGCGGCGGC GCTCCGCCAG
CTGTCCTACT TCTGGCCGGA CGCCGTGGGC GGGTCGCTGC CGCGGATCGC CGAGTACAAG
GCGCCGCTGG TCGGCGAGGC GAGCGGGCGT CTGGGGCTCG GAGCGGACCG GCTCGCCATC
CGAGACCTCG CGTCCGAGAT CGAGTGGGCG AAGGTCAGCC TCGTGACGGC CGACGACTAC
GTGCGGGCCG CCTCCGCCGC CGGGAGGCCC GGCGCGGCCG GGCACGACCT GACCACCGTG
GCCCGCCTCC TCACGATGTA CGAGGAGTGC AAGACCGAGC GCGGGGTCAT CGACTTCGAG
GACGTCCTGC TCCTGACGGT CGGGATCCTC GCGGAGCGGG ACGACGTCGC CCGCGCCGTG
CGCGCGCAGT ACCGCCACTT CGTGGTGGAC GAGTACCAGG ACGTCTCGCC GCTGCAGCAG
CGGCTCCTCG AGCTGTGGCT GGGTGAGCGC CGCGAGCTGT GCGTGGTGGG CGACGTGTCC
CAGACGATCT ACTCGTTCAC CGGTGCGTCG CCGCGCTACC TCACGGACTT CCCGCGCCGG
TACCCGGAGG CCGACGTCGT CCGGCTCGTG CGTGACTACC GGTCGACGCC GCAGGTGGTC
CGCCTGGCCA ACGACGTGCT CGCCCGAGCC GGCCGCGCAC GGTCCAGTGC CGCCGTCGAG
CTCGTGGCGC AGCGGCCGTC AGGGCCGGCA CCGACGTTCG ACGCCTACGA CGACGACGCC
GCGGAGGCCC AGGCGATCGC GCGGCGGATC GCGGCGCTGG TCGCCGGCGG GGTCCGGACC
AGCGAGATCG CGATCCTGTA CCGCACGAAC GCGCAGGCGG AGGCGTTCGA GCAGGCGCTC
GCCCAGGCCG GCATCGGGTA CCTGGTCCGG GGCGGCGAGC GCTTCTTCGC GCGGCGTGAG
GTGCGCGAGG CGGTCGTGCT CCTGCGTGGC GCCGCACGCG CCGCGGACGA GCGGCCGGTG
GGCGAGATCG TGCGCGACGT GCTCGGCGGT GCGGGCTGGT CCGCGCAGGC TCCGACGGCG
CGCGGAGCGG TGCGGGAGCG GTGGGAGTCG CTCGACGCGC TCGTCCAGCT CGCCGACGAC
CTGCACGAGC GGCGCGACGC CGACCTGCCG GCCCTGCTCG CGGAGCTCGA CGAACGCGCG
GCGGCTCAGC ACGCGCCGAC GGTGGAGGGC GTCACCCTGG CGTCGCTGCA CGCGGCGAAA
GGCCTCGAGT GGGACGCCGT CTTCCTCGCC GGGGTCAGCG ACGGGCTCCT GCCGATCTCG
CTCGCCGAGG GTGACGAGGC GATCGCCGAG GAGCGCCGGC TCCTGTACGT CGGCGTCACC
CGGGCCCGGG AGCATCTCGC CCTGTCGTTC GGACGGGCGC GGACGCCGGG AGGCCGGGCT
ACCCGCAAGC CGTCCCGGTT CCTCGACGGG ATCTGGCCGG GTGACGGCAC GGCGGGCCAG
GGCAGCGAGC GGTCGCGGCG GAAGGCGCGG GCACAGGCGC TCGCCGCCGC GCTCGACGAC
GGCGAGGCCG ATCCCGAGGT GTTCGAGCGG CTGCGGGCGT GGCGCGCGGA CGTCGCGCGC
GAGACGAGCA AGCCCGCGTA CACGATCCTG CACGACACCA CGCTCGTGGC GATCGCGACG
GCGAAGCCTC GCGACCTGCG CCAGCTCGCG GTGCTGCGGG GGATCGGCGC CGCGAAGCTC
GAGGCGTACG GAAGCGCCGT GCTCGCCCTC GTGCGCGGGG AACCGCTGCC CGTGGACAGC
TCCGGCGGGC GGTGA
|
|---|
| Protein sequence | MVTVPVTDAR MLLDALDDDQ RAVASSLTGP LCVLAGAGTG KTRAITYRIA HGVQAGAFEA
SRVLAVTFTA RAAGEMRSRL RDLGVGGVQA RTFHAAALRQ LSYFWPDAVG GSLPRIAEYK
APLVGEASGR LGLGADRLAI RDLASEIEWA KVSLVTADDY VRAASAAGRP GAAGHDLTTV
ARLLTMYEEC KTERGVIDFE DVLLLTVGIL AERDDVARAV RAQYRHFVVD EYQDVSPLQQ
RLLELWLGER RELCVVGDVS QTIYSFTGAS PRYLTDFPRR YPEADVVRLV RDYRSTPQVV
RLANDVLARA GRARSSAAVE LVAQRPSGPA PTFDAYDDDA AEAQAIARRI AALVAGGVRT
SEIAILYRTN AQAEAFEQAL AQAGIGYLVR GGERFFARRE VREAVVLLRG AARAADERPV
GEIVRDVLGG AGWSAQAPTA RGAVRERWES LDALVQLADD LHERRDADLP ALLAELDERA
AAQHAPTVEG VTLASLHAAK GLEWDAVFLA GVSDGLLPIS LAEGDEAIAE ERRLLYVGVT
RAREHLALSF GRARTPGGRA TRKPSRFLDG IWPGDGTAGQ GSERSRRKAR AQALAAALDD
GEADPEVFER LRAWRADVAR ETSKPAYTIL HDTTLVAIAT AKPRDLRQLA VLRGIGAAKL
EAYGSAVLAL VRGEPLPVDS SGGR
|
|---|
| |