Gene Bcav_2845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2845 
Symbol 
ID7860376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3179045 
End bp3180184 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content73% 
IMG OID643866942 
ProductABC transporter related 
Protein accessionYP_002882852 
Protein GI229821326 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.649643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG TCGAGCTGAG GGCCGTCGTC AAGACGTTCC CCGACCCGGG CGCCGGGGAG 
ACGACAGTCC TGCACGGGAT CGACATCCGT GCCGGGAGCG GCCAGTTCGT CGTCCTGCTC
GGCCCCTCGG GCTGCGGCAA GTCGACGTCG CTCCGGATCG TCGCCGGGCT GGAGTCCGCC
ACGAGCGGCG ACGTGCTCAT CGAAGGCGTC CGCGTGAACG AGGTCCCCGC CGCCAAGCGT
CACATCGCCA TGGTGTTCCA GAACTACGCG CTGTACCCGC ACCTCACCGT GCTCGAGAAC
ATCGTGTTCG GGCTGCGCGT GCGCAAGGTG CCGAAGGCGG AGCGGGAGGC GAAGGCGCGC
GACGCCGCCG AGCGCGTCGG GCTCGAGGCC TACCTCAAGC GGCGGCCCAG CCAGCTGTCC
GGCGGGCAGC GGCAGCGGAC CGCTCTCGCC CGCGCGCTCG TGAGCGACGC GAAGGTCGTG
CTCATGGACG AGCCGCTGTC GAACCTCGAC GCCCGGCTGC GCCACCAGAT GCGCGTCGAG
CTGCGCGAGC TCCAGCGCAG CCTCGGCCTC ACCGTGCTCT ACGTGACCCA TGACCAGGTC
GAGGCCATGA CGATGGCCGA CCATGTCGTC GTCATGCGCG ACGGGAACGT GGCGCAGGCG
GCCTCTCCGG TCGACCTGTA CACGGACCCG GCGGACGCCG GGGTGGCGGC CTTCATCGGT
TCGCCGCCGA TGAACCTGCT GCCCGGCCGG CTCGACGAGG CCGGGCTCCG GCTCGCCGGC
GACGGCGCCG GGCTGCCGAT CCCCACCGCC GTCGCCACCC ACGGCCTCGC CGACGGCCGC
CTCACCGTCG GTGTGCGGCC CGAGTCGCTC GCCCTGACCG ACGACGCCGC GGCACCGCTC
GCCGGCACCG TCCGCCTCAG CGAGATCCTC GGCGCCGAGA CGCTGCTCAC CGTCGACCTC
GCGCCGGGCG AGCAGGTCGT GGCCCGGCTG CCCGGGATCG TCCGGGTGGC CGACGGCGCT
CACGTGCGGC TCGCCGTCGC GCACGACGAC GTCCGGTACT TCGACCACAC CAGCGGGCGC
CGGCTCGCCG GGGCCGACGA CGACCCCGCA CCCCTCGAGA GAACAGGAAA CGCGCGATGA
 
Protein sequence
MSDVELRAVV KTFPDPGAGE TTVLHGIDIR AGSGQFVVLL GPSGCGKSTS LRIVAGLESA 
TSGDVLIEGV RVNEVPAAKR HIAMVFQNYA LYPHLTVLEN IVFGLRVRKV PKAEREAKAR
DAAERVGLEA YLKRRPSQLS GGQRQRTALA RALVSDAKVV LMDEPLSNLD ARLRHQMRVE
LRELQRSLGL TVLYVTHDQV EAMTMADHVV VMRDGNVAQA ASPVDLYTDP ADAGVAAFIG
SPPMNLLPGR LDEAGLRLAG DGAGLPIPTA VATHGLADGR LTVGVRPESL ALTDDAAAPL
AGTVRLSEIL GAETLLTVDL APGEQVVARL PGIVRVADGA HVRLAVAHDD VRYFDHTSGR
RLAGADDDPA PLERTGNAR