| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2778 |
|---|
| Symbol | |
|---|
| ID | 7861186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3087487 |
|---|
| End bp | 3088110 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866875 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002882785 |
|---|
| Protein GI | 229821259 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0630256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCATCTC GGGAGGTCGG CGTCCTGCCC GCGGATCGGC GCGCCCTGCT GCTCGCGACG
GCGGCTCGCG AGTTCGCCGC GGCGGGGTAC GAGCGGGCCT CGCTCAACCG GATCATCGCC
GAGTGCCGGA TGAGCAAGAG CTCCTTCTAC CACTACGTCG ACGGCAAGGA GGCACTGTTC
GACGCCGTCG TCGACGAGGT CGGCCGGGCG CTCGCCGTGG ACCTGGCCGT TCCCGATCCG
AGGGGGCTGA CCCGCGGCGA CTTCTGGGAA CGCGTGGGCG AGCTCGTCGA GCGGATCGAC
CGGCTCGGGC AGCAGGAGGG CTCGTACCTC GCCCTCGCGC AGCTCTTCCA CCTGCCCGAC
GCGCCGGCGT CGCCGGCTCT CGTGCGCACG CGTGCCGCGA TGGCCGCCTG GCTCGACGGC
GCGCTGGCCG CCGGGCGCGC TGCCGGCGCC GTCCGCGACG ACCTGCCGCC GGACCTGCAG
GCGCGCCTCG CGTTCGCGGT GCTGCAGGCG ATGGACTCCT GGTCCGTCGC GCACTCCGAT
GCGCTCGGTA GGGCGGAGCG GGAGCGGCTC GTCGTCGCCC AGGTCGACGC GCTGCGCCGC
CTGCTCGGGG CGGATCCCGC CTGA
|
|---|
| Protein sequence | MASREVGVLP ADRRALLLAT AAREFAAAGY ERASLNRIIA ECRMSKSSFY HYVDGKEALF
DAVVDEVGRA LAVDLAVPDP RGLTRGDFWE RVGELVERID RLGQQEGSYL ALAQLFHLPD
APASPALVRT RAAMAAWLDG ALAAGRAAGA VRDDLPPDLQ ARLAFAVLQA MDSWSVAHSD
ALGRAERERL VVAQVDALRR LLGADPA
|
|---|
| |