Gene Bcav_2739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2739 
Symbol 
ID7860177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3044123 
End bp3044533 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content69% 
IMG OID643866836 
ProductPilT protein domain protein 
Protein accessionYP_002882746 
Protein GI229821220 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.517904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTG CCGTCGACAC GAATGTGCTC CTCGATGTCC TGGGCGCCGA TCCCACGTTC 
GGGCGCGCCT CACAGCACGC GCTGCGCGAG TCCATGCGCG CCGGTCGACT CATCGTGTGC
GAGGTCGTCT GGGCGGAGAC CGCAGCGTGG TTTCCCGAGC CCGAAGCCGC GCAGGAGGCA
CTCGCCGCAC TCGAGATCGC TCTCGTGCCG GGTGACGAGT CGACGGCGAT GACAGCGGCT
CGGACGTGGC GCAGCTATCG CAATGACGGC GGACGACGCG AGCGTGTGAT CGCCGATTTT
CTCGTCGCCG CCCACGCGGC ACGTCACGCG GACCGACTCC TCACGCGGGA CCGAGGCTTC
TACCGCGACC GCTTCTCGGC CCTCGAGATC CTCGACCCGA CCTCGGCCTG A
 
Protein sequence
MITAVDTNVL LDVLGADPTF GRASQHALRE SMRAGRLIVC EVVWAETAAW FPEPEAAQEA 
LAALEIALVP GDESTAMTAA RTWRSYRNDG GRRERVIADF LVAAHAARHA DRLLTRDRGF
YRDRFSALEI LDPTSA