Gene Bcav_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2723 
Symbol 
ID7860161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3027717 
End bp3028760 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content75% 
IMG OID643866820 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002882730 
Protein GI229821204 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.858464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCC GGCGCGAACG GCCCCCGCGG CAGGCGGACG TCGCCCGCCT GGCCGGGGTG 
TCGCAGTCGG CCGTCTCGCG CGTGGTCAGC GGCGACCTCG CCCGGATCCC GGCCGCCACG
CAGGACCGGA TCCGCCTCGC CGTGCGCGAG CTCGGGTACG TGCCGAACCC GGCCGCCCGG
AGCCTGCGCC GCCGCCGCAA CTCGCTGCTC GGTGTCCACA CGTTCGAGCC GGTCTTCTCC
CGGGCGCGGG ACGGCTTCTA CGTCGACTTC CTGCTGGGCA TCGAGGAGCG CGCCGAGGAG
TCCGGGAACG ACCTCGTCAT CTTCACGTCC GCGGCCGGCG GGGACGGGTC GCGCTCGGTG
TACCGCTCCG GCGTGAACCG GCTCGGCATC GCGGACGGCA GCATCCTGCT CGGCGTCGCC
ACCGACGCGC ACGAGCTCGC ACGGCTGGCG GCCGAGGGGT ACCCGTTCGT GCACATCGGA
CGCCGGGAGG TGCCGGGTGC CCAGATCCCG TGCGTCGTGC CGGACTACCG GGCGGCCGCC
GCGGAGGTCG TGGGCCACCT CGTGGAGCTC GGGCACCGGC ACTTCGCGTA CCTGCGCGAC
CACCACGGCA TGCCGCCGTA CGACGACCGG CGCTCCGGGT ACGCGGCGGC GCTCTCGGCG
CACCGGCTGC GCGACGTCTC GCCCGGCGCG CAGGGGCGGG CGGGGATCAC CGACGAGTGG
ATCGACCGGA TCGCCGACGG GCCGACGACG GCGGTGGTCG CGGAGAGCGT GTGGCTCGCC
GACCGTCTCG TGGCCGGGCT GGCCGCGCGA GGGCTCAGCG TCCCCCGCGA CGTGTCGGTG
GCGGTGCTCG AGACCCGGGA GCCCGACTCC GCGATCGCGT GGGACTGCCT GGTGATCCCG
CGCGAGGAGA TCGGCCGGAT CGCCGTCGAC CGCCTGATCG ACATCTTCGA GGACCCCGGC
CAGGACGCGT CCATGACCTG GGTGCCGTGC TCGATGGCAC CCGGCGACAC CATCGCAGCA
GCCCTTCAGA AGGAGAGAAC GTGA
 
Protein sequence
MTARRERPPR QADVARLAGV SQSAVSRVVS GDLARIPAAT QDRIRLAVRE LGYVPNPAAR 
SLRRRRNSLL GVHTFEPVFS RARDGFYVDF LLGIEERAEE SGNDLVIFTS AAGGDGSRSV
YRSGVNRLGI ADGSILLGVA TDAHELARLA AEGYPFVHIG RREVPGAQIP CVVPDYRAAA
AEVVGHLVEL GHRHFAYLRD HHGMPPYDDR RSGYAAALSA HRLRDVSPGA QGRAGITDEW
IDRIADGPTT AVVAESVWLA DRLVAGLAAR GLSVPRDVSV AVLETREPDS AIAWDCLVIP
REEIGRIAVD RLIDIFEDPG QDASMTWVPC SMAPGDTIAA ALQKERT