| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2645 |
|---|
| Symbol | |
|---|
| ID | 7861527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2944157 |
|---|
| End bp | 2945737 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643866738 |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002882652 |
|---|
| Protein GI | 229821126 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGACG TGGTCGTCGA CCTCGAGCGG AACCTCGCCG ACACCCCGCT CCCGCTGGAG
CTCGAGGGGG CCGCCCAGGC GCGACTCCTG CGTGACCGGG TGCGCGCGCA GATCACGTCC
CACCTCCTGC CGCGGCTGCG CCAGCTCGCG ATGCCGGCGA TCGTCGTCGT CGGCGGCTCG
ACGGGCGCCG GGAAGTCCAC GCTCGTGAAC ACGGTCGCCG GCGAGGTCGT GAGCGAGGCC
GGCGTCCTGC GGCCGACCAC GAAGCAGCCG GTGCTCGTCG TCCACCCGGA CGACCGGGAG
CTCGTCGCCG ACCATCCGGT CGTCGAGCAC ACGGCGCTCG TCACCGCCGC CGGCATCCCC
CAGGGCGTCG CGCTGCTCGA CGCGCCGGAC CTCGACTCCG TGCACACCGA GAACCGGCAC
CTCGGCCTCG AGCTCGTGGA GACCGCCGAC CTCTGGCTCT TCGTCACGAC GGCGGCCCGG
TACGGCGACG CCCTGCCGTG GGGGATCCTG CGCACGGCCG ACGAGCGCGG CGTCTCGCTC
GCCGTCGTCC TCAACCGCGT GTCCGCCGAC GTGCTCGTCG AGGTCCGCGC CGACCTGCTG
CACCGGCTCG ACGAGGCCGG GTTCGGGTCC GTGCCGATGT TCGTCGTCCC CGACGCCGGC
CCCCACAGCG GACCGCTGGA GCCGCGCTAC GTCGAGGACG TCGTCGGCTG GCTCGAGCTC
CTGGCCGGCC GGGCCACCGG GCGCGGCGTC ATCGCCCGGA CCCTGCGCGG CGTCTGGGCG
CCGTTGCGGG CCGAGATCGC CACGCTCACG GCAGCGGTGG AGGCCCAGCT CGACGCCGTC
GACGCGCTCG CCGCGGCGGC GCGGGCGGCG GCCGCGGAGC CGGCGGACGC GCTCGCCGAG
CAGGTCACCT CGGGCGGTGT CGCCGAGGGG GCGCCCGTCA CCCACTGGCT CGCCGTGGCC
AGCTCCGGCG CCCCGCTGGC CCCGCTGGTC GACCTGCCCC GCGGCCGGCT GGCCGCGCGC
CGGCTGCGGC GCACCACCCC GGAGCGGACG ACGGCGCTGC GCGGGGTTGC GGCGGACGCC
CGGCAGGCGT TCATCGACCT GGTGGGCGCG GCCGCGCTCG ACGTCGAGCT GCGGATCCGC
GAGGCGTGGG ACGACCCGGC GCTCGGCGGT CGCGAGCTCG CAGCCCGGCT CACCCGCAGC
GACGCCGTCG AGCGCCGCGG CGCGCGCATC GTCGCCGCGT GGGACGGCTG GGTGGGCGAG
GTGCGCGCCG TCGTCGAGAA GCCGGAGCTC CCGCACTCGG CGGCCGAGCT CGACGGCGCG
CTGCTCGACG ACGAGGGCCG CGTGCTGCTG GTCGCGCTCG CCGCCGTCGG GATCGAGGGG
GCCGCCCGCG CCGCACGCGC GATCTGGCCG GACGCCGCCG ACGTGCGCAT CAACCGCGCC
GCGACGCTGC TCGTCGACCG GGCCCGCACG GTCATCGCCG CAGAGGGCGA GACGTTCGGC
AGCCTGGCCG TGGCGGAGAT CCCACCGGAT GCCGCGTCGG CACTGCGCCT GCGCGCCAGC
GAGCTGAGGG CCCACGCATG A
|
|---|
| Protein sequence | MLDVVVDLER NLADTPLPLE LEGAAQARLL RDRVRAQITS HLLPRLRQLA MPAIVVVGGS
TGAGKSTLVN TVAGEVVSEA GVLRPTTKQP VLVVHPDDRE LVADHPVVEH TALVTAAGIP
QGVALLDAPD LDSVHTENRH LGLELVETAD LWLFVTTAAR YGDALPWGIL RTADERGVSL
AVVLNRVSAD VLVEVRADLL HRLDEAGFGS VPMFVVPDAG PHSGPLEPRY VEDVVGWLEL
LAGRATGRGV IARTLRGVWA PLRAEIATLT AAVEAQLDAV DALAAAARAA AAEPADALAE
QVTSGGVAEG APVTHWLAVA SSGAPLAPLV DLPRGRLAAR RLRRTTPERT TALRGVAADA
RQAFIDLVGA AALDVELRIR EAWDDPALGG RELAARLTRS DAVERRGARI VAAWDGWVGE
VRAVVEKPEL PHSAAELDGA LLDDEGRVLL VALAAVGIEG AARAARAIWP DAADVRINRA
ATLLVDRART VIAAEGETFG SLAVAEIPPD AASALRLRAS ELRAHA
|
|---|
| |