Gene Bcav_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2588 
Symbol 
ID7860755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2877573 
End bp2878946 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content75% 
IMG OID643866679 
Productglycoside hydrolase family 4 
Protein accessionYP_002882595 
Protein GI229821069 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG TGAGACTCAC GATCGTCGGG GGTGGCGGAT TCCGCGTGCC GCTGGTGGTC 
CGTGCGGTCG CCGCGGCCCG GGACCGCACG GGCATCGACG AGATCGTGCT CACCGATCCG
GACGCCGACC GGCTGCGCGC GGTCGAGGCG GTGCTGGCCG CCGACGCCGA GGGTTGGGGC
AGCGGGGGAG GACCCCGCGT CGTCGCCACG CCGGATCTCG ACGTCGCCCT GTCCGGTGCC
GCCGTGGTCT TCAGCGCGAT CCGGGTCGGG GGGACCGCCG GGCGCATCGT CGACGAGCGG
GTGCCCCTGG CGCTGGGCCT GCTCGGCCAG GAAACGATCG GAGCCGGCGG GATCGCGTAC
GCGCTGCGCA CGGTCGGCGT CGTCGACGAT CTCGCCGCCC GCATCGCGCG CCACGCACCC
GACGCGTGGA CGATCAACTT CACGAACCCG GCGGGGATCA TCACGGAGGC GATGCGCACC
CACCTCGGGG ACCGCGTCGT CGGGATCTGC GACACCCCCA TCGGCCTGGT GCGACGCGTC
GGCCGGGTGC TCGGCGTGGA CGTGGCCGAC GCCGTCGTCG ACTACGTCGG GCTCAACCAC
CTGGGGTGGC TGCGGGGCCT GCACGTCGCG GGGCGGGACG TGCTGCCCGG CCTGCTCGCC
GACGACGCCG CGCTGACGCG GATCGAGGAG GCGCGCGTGC TCGGCGTCGA CTGGGTACGT
GCCCTGGGGG CCCTGCCCAA CGAGTACCTC TACTACTACT ACTACGCCCG CGAGGCGACG
GAGCGGATCA CCGGGGCGAC GGCGACGCGG GGGGAATTCC TCGACGCCCA GCAGGGCGGC
TTCTACACGG CGGCCGCGGG TGCGCGGCCG ACGGCGGCCG CCTCGGCATG GGAGCGGGCG
CTGCACGAGC GCGAGGCGAC CTACATGGCC GAGGCCCGCG ACGACGGCGA GGAGCGTGAC
GCCGAGGACG TCGGTGGCGG CTATCACGAG GTCGCCGTCG ACCTCATGGC GGCGCTGCTC
GGCTCCGAGG CGCACCAGAT GATCCTGGAC GTCGCGAACG CCGGCCGGAT CACCGGGCTC
CCGGCGGACG CCGTCGTCGA GGTGCCGTGC GCCGTCGATG CGCGTGGCGT CCAGCCGCTC
GGGCCGGGCA CGGGCGATCT CGCTCAGCCG GACGCGCACA TGCTCGGCCT CATGGCCCAG
CTCAAGGCGG CCGAGCGGGC CGCGATCGAG GCAGCGCGGG CGGGCTCGCG CTCGCTCGCC
TGGACGGCGT TCGCGCTGCA CCCGCTGGTC GACTCGGTCG ATCTCGCGCG GCGGCTGGTG
GACGACTACG TCGCCGCCTC AGACCTCATG GCGGCGGCGC TGCCGCACCC GTAG
 
Protein sequence
MTGVRLTIVG GGGFRVPLVV RAVAAARDRT GIDEIVLTDP DADRLRAVEA VLAADAEGWG 
SGGGPRVVAT PDLDVALSGA AVVFSAIRVG GTAGRIVDER VPLALGLLGQ ETIGAGGIAY
ALRTVGVVDD LAARIARHAP DAWTINFTNP AGIITEAMRT HLGDRVVGIC DTPIGLVRRV
GRVLGVDVAD AVVDYVGLNH LGWLRGLHVA GRDVLPGLLA DDAALTRIEE ARVLGVDWVR
ALGALPNEYL YYYYYAREAT ERITGATATR GEFLDAQQGG FYTAAAGARP TAAASAWERA
LHEREATYMA EARDDGEERD AEDVGGGYHE VAVDLMAALL GSEAHQMILD VANAGRITGL
PADAVVEVPC AVDARGVQPL GPGTGDLAQP DAHMLGLMAQ LKAAERAAIE AARAGSRSLA
WTAFALHPLV DSVDLARRLV DDYVAASDLM AAALPHP