Gene Bcav_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2554 
Symbol 
ID7857846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2841632 
End bp2842741 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content74% 
IMG OID643866646 
ProductABC transporter related 
Protein accessionYP_002882562 
Protein GI229821036 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.118826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGA TCACCACCCA CGCGCTGGTC AAGGAGTACC CGGGCGGTGT CCGGGGCGTC 
GACGGCGTCG ACGTGACGAT CGACGACGGC GAGTTCTTCG CGCTCCTCGG ACCGTCCGGC
TGCGGCAAGA CGACGCTGCT GCGCTCGATC GCGGGCCTCG AGACCGTCAC CGAGGGTCAG
CTGCTCATCG GCGACCGGGA CGTCACGACC ACCGAGCCGG GCCAGCGCGG CGTGGCGATG
GTGTTCCAGG ACTACGCCCT GTTCCCGCAC ATGGACGTCG CCGACAACAT CGCGTACCCG
CTCAAGATCC GGCGCGAGCC GCGGGCCCGA CGGCGTGGCG TGGCGACCGA GGTGGGCGAC
GGCCTCTCCC TCACCGGGCT CATGGAGCGC CGTCCCGCCC AGCTCTCCGG CGGCCAGCAG
CAGCGCGTGG CTCTCGCCCG GGCGGTCGCG ACCCGCCCTG ACGTCCTCCT GCTCGACGAA
CCGCTGTCGA ACCTGGACGC CCGGCTGCGG CTCGAGGCGC GCACGTTCCT CAAGGAGCTG
CAGCGCGACC TCGGGGTGAC GACGGTCTTC GTGACGCACG ACCAGGCGGA GGCGCTCGCG
CTCGCCGACC GCATCGCCAT CATGCGCGCC GGGCGGCTCG AGCAGGTCGG GACCCCGCGT
GACGTGTTCG CGCGCCCGGC GACGACGTTC GTCGCGGGAT TCATCGGGTC CACGCCGATG
AACCTCGTCA CCACGCGGGT CGCCGGCGGG CGCATCGCGA TCGGCGACCA GAGCGCGCCC
CTGCCCGCGA GCGCCGCGGG CGTCGCCGCC GACGGCGCGG ACGTGGTGTG GGGCGCCCGG
CCCGAGTACC TCACGTGGAG CCCGGCTCAG GTGCCCGACG GCCTCGCCGC CGAGGTGAGC
GTCGTCGAGA ACCTCGGTGC GTCCGTGCTC GTCACCGTCC ATGTCGGCGA GCACCGGCTG
CAGCTCGTGG TCGGGGAGGA CGACGAACCG GCACCCGGCG GCACCGGCTG GATCGTGCCG
ACCGCGCGAC GGACGTTGCT GTTCGACGCC GACAGCGGGT CGCGCCTGGA CGCGAGCGCC
GCCGGTTCGC TCGACGCGGT CCCCGCGTGA
 
Protein sequence
MAAITTHALV KEYPGGVRGV DGVDVTIDDG EFFALLGPSG CGKTTLLRSI AGLETVTEGQ 
LLIGDRDVTT TEPGQRGVAM VFQDYALFPH MDVADNIAYP LKIRREPRAR RRGVATEVGD
GLSLTGLMER RPAQLSGGQQ QRVALARAVA TRPDVLLLDE PLSNLDARLR LEARTFLKEL
QRDLGVTTVF VTHDQAEALA LADRIAIMRA GRLEQVGTPR DVFARPATTF VAGFIGSTPM
NLVTTRVAGG RIAIGDQSAP LPASAAGVAA DGADVVWGAR PEYLTWSPAQ VPDGLAAEVS
VVENLGASVL VTVHVGEHRL QLVVGEDDEP APGGTGWIVP TARRTLLFDA DSGSRLDASA
AGSLDAVPA