Gene Bcav_2535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2535 
Symbol 
ID7857827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2822080 
End bp2822823 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID643866628 
Productsignal peptidase I 
Protein accessionYP_002882544 
Protein GI229821018 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.699875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.317865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAGG AGCACGCCGC GGAGCAGACG GCGCCGCCTG ACCACGGCGC GCCGGGTGCT 
GAGCGCCGTG GAGGCAAGGC GTCCTCCGCG CTCCGCGAGA CGGTCATCGT GCTCGTCAGC
GCGCTCGTCC TGTCGCTGCT GATCAAGACG TTCCTCGCGC AGGCGTTCTA CATCCCGTCG
GGGTCGATGC AGACGACGCT CGACATCGGG GACCGGGTGC TCGTCAACAA GCTCGCACCC
GGCCCGTTCG ACGTGAACCG CGGCGACGTC GTCGTGTTCG TCGACCCGGG CGGCTGGCTG
CCGCCGACCG TGGAGGAGGA GTCCTCACCG GCGGCGGAGG CCGTGCAGCG CGGGCTCGAG
TTCATCGGCC TGCTCCCGGC CGACTCCGGG AACCACCTCG TGAAGCGGCT CATCGGGATG
CCGGGCGACC ACGTCGTGTG CTGCGACCCC GAGGGACGCA TCACGATCAA CGGGGAGGCG
ATCGAGGAGC CGTACGTCAT CGCCGGCGCC GCACCGAGCA ACGACCCGTT CGACGTCGTC
GTCCCCGACG ACCACGTGTT CGTGCTCGGG GACAACCGGC CGGACTCCAA GGACTCGCGG
TACAACCCCG GGAGCCCGGG CGGCGGGATG GTGCCGATCC GCAACATCGT CGGCGTGGCC
TTCGTCACGA TCTGGCCGGT CGACCGCTGG ACCCTGCTGA GCAACCCCGG CGAGACCTTC
GCCGACGTCC CCGACCCGAG CTGA
 
Protein sequence
MTKEHAAEQT APPDHGAPGA ERRGGKASSA LRETVIVLVS ALVLSLLIKT FLAQAFYIPS 
GSMQTTLDIG DRVLVNKLAP GPFDVNRGDV VVFVDPGGWL PPTVEEESSP AAEAVQRGLE
FIGLLPADSG NHLVKRLIGM PGDHVVCCDP EGRITINGEA IEEPYVIAGA APSNDPFDVV
VPDDHVFVLG DNRPDSKDSR YNPGSPGGGM VPIRNIVGVA FVTIWPVDRW TLLSNPGETF
ADVPDPS