Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2446 |
Symbol | |
ID | 7861980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2736028 |
End bp | 2736912 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643866542 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002882458 |
Protein GI | 229820932 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.292475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTC AGTCCGTCCT GTTCGACGCG CCCGGCCCCC GCGCCCGTCG CAATGCCTGG ATCGCCAACG GCGTCGGCAT CCTGCTGCTC GCAGGCATCG CCGTCGTCGT CCTCACGAGA CTCGGCGAGA AGGGACAGCT GGACCCCGAC AAGTGGCTGC CCCTGTTCAC GTCGCGGTCG TGGCTCAACT TCTTCCTTCC GGGCCTGCAG AACACGTTGG TCGCGGCGCT CTACGCGATC GTCCTGGCGC TCGCGTTCGG GCTCCTGTTC GGGCTCGGCC GCCTCGCGCC GCTCGCCCCG GTGCGCTGGG TGTGCGGGAC TGTCGTGGAG TTCTTCCGCG CCGTTCCGGT GCTCATGATG ATGATCGTCA TCTATCTGGG TCTGGGGTTC TCGAGGGTCG TGGACGCGAG TCTCGTCCCG CTGATCGCCG TCGTCGGCGG CCTGACGCTC TACAACGGCG CCGTGATCGC GGAGCTCGTG CGGTCCGGGG TGTTCGGCCT GCCGCGGGGC CAGAAGGAGG CGGCCTACGC CGTCGGGATG ACGCACGGCC AGTCCCTCCG GGTCGTGGAG CTGCCGCAGG CGTTGCTCGC GATGCTCCCG TCGCTCGTCA GCCAGTTCGT CGTCATCCTC AAGGACTCGG CGCTCGGCTC GTGGGTGACG TACGGCGAGC TGTTGCAGTT CTCTCGTCAG CTGGGCACGA GCGACGGGAA CCTCCTGCAG ACGCTGCTGA CGGCCGCGGT GATCTTCATC GTCATCAACT ACGTGCTGAC GCGCGCCGCG CAGTACCTGG CCTCGCGGAT CTCGCGGCGC ACGGCGGCAC GGACGACTGC CGCTCCGCCG GCCGTGCTCG CGGGGTCCGC ACGCGGGACC GCCGGGGCCG CCTGA
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Protein sequence | MSAQSVLFDA PGPRARRNAW IANGVGILLL AGIAVVVLTR LGEKGQLDPD KWLPLFTSRS WLNFFLPGLQ NTLVAALYAI VLALAFGLLF GLGRLAPLAP VRWVCGTVVE FFRAVPVLMM MIVIYLGLGF SRVVDASLVP LIAVVGGLTL YNGAVIAELV RSGVFGLPRG QKEAAYAVGM THGQSLRVVE LPQALLAMLP SLVSQFVVIL KDSALGSWVT YGELLQFSRQ LGTSDGNLLQ TLLTAAVIFI VINYVLTRAA QYLASRISRR TAARTTAAPP AVLAGSARGT AGAA
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