Gene Bcav_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2444 
Symbol 
ID7861978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2734411 
End bp2735295 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID643866540 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002882456 
Protein GI229820930 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.474573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCA CGCGAGTGGC AGCTCTCGGC CTCGCGGCCG TCGGCGCCAT GGTCCTGGCC 
GCCTGTACGG CACAGGCGCC CGGCGACGAG GAGACGGGCG GGGAGGAGAC CGGCGGCGAG
GAGACGGCGG CCGCTGACTG CTCCGGCGCC GAGGGCACCA TCAACATCGG CATCAAGTTC
GACCAGCCCG GCCTCGGGTT CCGCGACGGG AACGAGTACA CCGGCTTCGA CGTCGACGTC
GCGACGTACG TCGCGTGCCA GCTCGGCTAC GCCGAGGACC AGATCGAGTG GGTCGAGTCT
CCGTCCGCCC AGCGCGAGAA CATGCTCCAG ACCGGGCAGG TCGACATGAT CTTCGCGACG
TACTCGATCA CCGACGAGCG CAAGGAGGTC GTGGCGTTCG CCGGGCCGTA CTTCGTCGCC
GGTCAGGACC TGCTCGTGCG GGCTGACGAG ACGGACATCG CCGGCCCGGA GGACCTCGAG
GGACGCAACC TGTGCTCCGT CACCGGCTCG ACCTCCGCGC AGCGGATCAA GGACGAGTAC
GCCGAGGGAA CGAACCTCGT CGAGCAGCCC GGCTACGCCG ACTGCGTGAC GGTGCTGCTC
GCCGGCCAGG TCGACGCCGT CACCACCGAC GACATCATCC TCGCCGGGCT CGCCGCCCAG
CCGGCGAACC AGGGGCAGCT GACGGTCGTC GGCGCCCCGT TCTCCGAGGA GAACTACGGC
GTCGGCATCC CGCAGGACAG CGAGCTGTGC GAGGACATCA ACGCGGCCAT CGCGCAGATG
ATCACCGACG GTGCGTGGGA GGAAGCCGTC ACGGCCAACA CCGAGGGCAC GGGCTACACG
CCCAACGCTG ACCTCAACCC GCCGGAGCAG GACGCCTGCG CCTGA
 
Protein sequence
MRSTRVAALG LAAVGAMVLA ACTAQAPGDE ETGGEETGGE ETAAADCSGA EGTINIGIKF 
DQPGLGFRDG NEYTGFDVDV ATYVACQLGY AEDQIEWVES PSAQRENMLQ TGQVDMIFAT
YSITDERKEV VAFAGPYFVA GQDLLVRADE TDIAGPEDLE GRNLCSVTGS TSAQRIKDEY
AEGTNLVEQP GYADCVTVLL AGQVDAVTTD DIILAGLAAQ PANQGQLTVV GAPFSEENYG
VGIPQDSELC EDINAAIAQM ITDGAWEEAV TANTEGTGYT PNADLNPPEQ DACA