Gene Bcav_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2247 
Symbol 
ID7861443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2527354 
End bp2528616 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content75% 
IMG OID643866339 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_002882260 
Protein GI229820734 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase
[TIGR03447] cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGCCT GGTCCTCACC CGACGTCCCC TCCCTCGACG ACCCGGGCGA GTGTCCGCGG 
GAGGTCCGGG TCCGTGACAC GGCGACCGGC GAGCTGACAC CGGCGGGCCA CGACGGCCGT
GCGTCGATGT ACGTGTGCGG CATCACGCCG TACGACTCGA CGCACCTGGG GCACGCGAAC
ACCTACGTGT CCTTCGACCT GCTGGTGCGG GCGTGGCGGG ACGCGGGGCT CGCCGTCACG
TACGTGCAGA ACGTGACCGA CGTGGACGAC CCGCTGCTCG AGCGCGCCGC GGCCACGGGC
GTGGACTGGC GGCAGCTCGC CGCCGACCAG ATCGAGCTGT TCCACCACGA CATGGTCGCG
CTCCGGGTCG TGGCGCCCGA GCACTACATC GGCGCCGTCG AGTCGGTGCC CGACGTCGTG
CGCGCGGTCG AGCGGATGCT CGCGGACCGG GCCGCCTACC GGGTGGGTGC GGCCGCCGAC
GGCGCCGGTG ACGGCGACGT CTACGCCGCG CTGTCGGCCG ACCCGCGGTT CGGCTCGCTG
GGCAGCCTCG ACGAGGCCGA GATGCTCGAG CTGTTCGGGG AGCGGGGCGG CGACCCCGAC
CGACTCGGCA AGCAGGCGCC GCTCGACCCC CTGCTGTGGC GTGTCGAGCG CGAGGAGGAG
CCCAGCTGGC CGGGGGAGTC GCTCGGCCGG GGTCGCCCGG GGTGGCACAT CGAGTGCGCG
ACGATCGCGG CCCGGTTCCT GGGCGTGCCG TTCGACGTGC AGGGCGGCGG GACCGACCTC
GAGTTCCCGC ACCACGAGAT GAGCGAGAGC CACCTGCGGG TGCTGACGGC GACGGCGCAC
CCCGCCCGAG CCCACGTGCA CGGCGGCATG GTGGCGTACC AGGGCCACAA GATGAGCAAG
TCGCGCGGGA ACCTCGTGTT CGTCAGCGAG CTCGTCGCGT CGGGCGTCGA CCCGATGGCG
GTGCGCCTCG TGATCCTCGC CCACCACTAC GCCGAGGACT GGGAGTACGA GGCGGGCGCG
CTCGGCCTCG CTGAGGAGCG GCTGGCGACG TGGCGGGCGG CTCTCGCCCA GGGGTCCGGA
CCGAGCGGCG CCGACGTCGT GGCGGGCGTC CGCGCCGCCC TGGCGAACGA TCTCGACGCA
CCCGGCGCCG TCGCCGTCGT CGACGACTGG GCCGCTGCGG CGATCGCCGG GTCGGGCGAC
GACGCCGCCG CCGGGGCGAC GGTCGCGCGA GCCGTGGACG CCCTGCTCGG CGTGGCTCTC
TGA
 
Protein sequence
MLAWSSPDVP SLDDPGECPR EVRVRDTATG ELTPAGHDGR ASMYVCGITP YDSTHLGHAN 
TYVSFDLLVR AWRDAGLAVT YVQNVTDVDD PLLERAAATG VDWRQLAADQ IELFHHDMVA
LRVVAPEHYI GAVESVPDVV RAVERMLADR AAYRVGAAAD GAGDGDVYAA LSADPRFGSL
GSLDEAEMLE LFGERGGDPD RLGKQAPLDP LLWRVEREEE PSWPGESLGR GRPGWHIECA
TIAARFLGVP FDVQGGGTDL EFPHHEMSES HLRVLTATAH PARAHVHGGM VAYQGHKMSK
SRGNLVFVSE LVASGVDPMA VRLVILAHHY AEDWEYEAGA LGLAEERLAT WRAALAQGSG
PSGADVVAGV RAALANDLDA PGAVAVVDDW AAAAIAGSGD DAAAGATVAR AVDALLGVAL