Gene Bcav_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2242 
Symbol 
ID7861438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2521651 
End bp2523333 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content71% 
IMG OID643866334 
ProductAAA ATPase central domain protein 
Protein accessionYP_002882255 
Protein GI229820729 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1222] ATP-dependent 26S proteasome regulatory subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC AGCACGACGA TCGCCGGCCG CCTGACACGG CGGACCGCGA CCTGGCACGG 
CAGGCCACCT CGCTCGCGGA GAAGAACGAG CGGCTGACGG CGGCGCTGAC CGCCGCTCGC
GCGCAGCTCG TCGAGATGAA GGCGCAGCTC GAGGAGGTCT CGAAGCCGCC GGGCAGCTAC
GCCTACTTCG CGGCCGCGCA CGCCGACGGC ACGGCCGACG TGTACTCGGC CGGCCGCAAG
CTCAGGCTCG GTGTCGCGCC CAGCGTGCCG CTGGCGAGCC TGCGTCCGGG CCAGGAGGTC
CAGCTCAACG AGGCGATGAC GGTCGTGGCC GCCGGAGGGT ACGAGCCGGT CGGCGAGGTC
GTCACCGTCA AGGAGCTCAT CGGGTCGGAC CGCGCGCTCG TGGTCGGCCG CGCCGACGAG
GAGCGCGTCG TGCGCCTCGC GGGCCGGCTC ATCGGTGAGA ACGTCCGGGT CGGCGACGCG
CTGACCATCG AGCCCCGCAC CGGGTTCGTG TTCGAGCGGA TCCCGCGCTC CGAGGTCGAG
GACCTCGTGC TCGAGGAGGT GCCCGACGTC GCGTACGCCG ACATCGGCGG CCTCTCCTCG
CAGATCGAGG CGATCCGGGA CGCCGTCGAG CTGCCCTTCC TGCACCCCGA CCTGTTCCGC
GAGCACGGCC TGAAGCCGCC GAAGGGCCTG CTGCTGTACG GGCCGCCCGG GTGCGGCAAG
ACGCTCATCG CGAAGGCGGT CGCGACGTCG CTGGCGCACA CCGCCGCACG GCGGGACGCC
GACGGCGAGC CCGCGGAGCT GCCGGACGGC GCGGCGCGCA GCTACTTCCT CAACGTCAAG
GGCCCCGAGC TGCTCAACAA GTTCGTCGGC GAGACGGAGC GGCACATCCG GCTGATCTTC
GCGCGAGCCC GCGAACGGGC CTCGCAGGGG ATCCCCGTCG TCGTCTTCTT CGACGAGATG
GAGTCGCTGT TCCGCACCCG CGGCACCGGC GTGTCCAGCG ACGTCGAGAC GACGATCGTG
CCGCAGCTGC TCGCCGAGAT CGACGGCGTC GAACGGCTCG ACAACGTGAT CGTCATCGGC
GCCTCGAACC GCGAGGACAT GATCGACCCG GCCATCCTGC GGCCCGGGCG CCTCGACGTG
AAGATCAAGG TCGAGCGGCC CGACGCCGAG GCGGCGCGCG ACATCTTCTC CAAGTACCTC
GTGGCCGACC TGCCGATCCA CCCGGACGAC CTCGCGGAGT ACGGGAACGA CGCGGCCACG
ACCGTCGCCG CGATGATCGA CCGCGCCGTC GGGCGCATGT ACTCGACGGC GCCCGAGAAC
GAGTTCCTCG AGGTGACCTA TGCGTCCGGG GACAAGGAGG TCCTGTACTT CAAGGACTTC
AACTCCGGCG CGATGATCCA GAACATCGTC GACCGGGCCA AGAAGCACGC GATCAAGGAC
CTGCTCGCCG GCGGCAGGCG CGGCATCCGG GTCGACCACG TGCTCGAGGC GTGCGTCACG
GAGTTCAAGG AGAACGAGGA CCTGCCCAAC ACCACGAACC CGGACGACTG GGCGCGGATC
TCCGGCAAGA AGGGCGAGCG CATCGTCTTC ATCCGGACGA TCGTCCAGAA GAAGTCGGGC
GAGACCGTGG GCTCGGTGGC GCGGGCGGTC GAGAACGTCG CGACGCCGGG GCAGTACCTC
TAG
 
Protein sequence
MSQQHDDRRP PDTADRDLAR QATSLAEKNE RLTAALTAAR AQLVEMKAQL EEVSKPPGSY 
AYFAAAHADG TADVYSAGRK LRLGVAPSVP LASLRPGQEV QLNEAMTVVA AGGYEPVGEV
VTVKELIGSD RALVVGRADE ERVVRLAGRL IGENVRVGDA LTIEPRTGFV FERIPRSEVE
DLVLEEVPDV AYADIGGLSS QIEAIRDAVE LPFLHPDLFR EHGLKPPKGL LLYGPPGCGK
TLIAKAVATS LAHTAARRDA DGEPAELPDG AARSYFLNVK GPELLNKFVG ETERHIRLIF
ARARERASQG IPVVVFFDEM ESLFRTRGTG VSSDVETTIV PQLLAEIDGV ERLDNVIVIG
ASNREDMIDP AILRPGRLDV KIKVERPDAE AARDIFSKYL VADLPIHPDD LAEYGNDAAT
TVAAMIDRAV GRMYSTAPEN EFLEVTYASG DKEVLYFKDF NSGAMIQNIV DRAKKHAIKD
LLAGGRRGIR VDHVLEACVT EFKENEDLPN TTNPDDWARI SGKKGERIVF IRTIVQKKSG
ETVGSVARAV ENVATPGQYL