Gene Bcav_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2238 
Symbol 
ID7861434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2518062 
End bp2518880 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content74% 
IMG OID643866330 
Product20S proteasome A and B subunits 
Protein accessionYP_002882251 
Protein GI229820725 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0784467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGG GGGGCGATCG GCTCCCCGAG GCGTTCCTGC GGCCCGGGAG CTCGTCGTTC 
GTCGAGTTCC TGCGCGAGGT CGCCCCGCAG TCCCACCCCG AGCACGCGCG GCCTGCCGGC
GCCGGCGACG TGGTGCACGC GACCACGATC GTCGCGCTGA GCTTCGCCGG CGGCATCGTC
ATGGCGGGCG ACCGGCGCGC CACGATGGGC TCGTTCATCG CGCACCGCGA GATCGAGAAG
GTCTTCCCGG GCGACGAGTA CTCCGCGATC GGCATCGCGG GCACCGCCGG GATCGGTGTC
GAGCTCGTGC GCCTGTTCCA GCTGGAGCTC GAGCACTTCG AGAAGATCGA GGGCGCGATG
CTGTCGCTCG AGGGCAAGGC GAACCGCCTC ACCACGCTCC TGAGGGGCAA CCTCGGGCTC
GCGCTGCAGG GACTCGCGGC GGTCCCGCTG TTCGGCGGGT ACGACCTCGA CCGCGCGGCG
GGCCGGATCT TCTCCTACGA CGTCACCGGC GGCCGCTACG AGGAGCGCAA CCACCACAGC
ATCGGCTCGG GCGGCATGTT CGCGCGCGGG TCGCTCAAGA AGCTGTGGCG CCCCGGCCTC
GGTGACCGCG ACGCGATCGC CGTCGCCCTC GCCGCGCTCG TGGACGCCGC GGACGACGAC
TCCGCGACGG GCGGCCCGGA CGCGCTCCGG GGGATATTCC CCGTGGTGGC CACCGTCACC
GCGGAGGGCT ACCGGCGGAT CGCCGAGGGC GAGCTGGCCG GCCTCGTCGC GGAGATCGAC
GCCGCACGGG CCCAGGCCCG GGAGGGGGAC ACGCGATGA
 
Protein sequence
MSTGGDRLPE AFLRPGSSSF VEFLREVAPQ SHPEHARPAG AGDVVHATTI VALSFAGGIV 
MAGDRRATMG SFIAHREIEK VFPGDEYSAI GIAGTAGIGV ELVRLFQLEL EHFEKIEGAM
LSLEGKANRL TTLLRGNLGL ALQGLAAVPL FGGYDLDRAA GRIFSYDVTG GRYEERNHHS
IGSGGMFARG SLKKLWRPGL GDRDAIAVAL AALVDAADDD SATGGPDALR GIFPVVATVT
AEGYRRIAEG ELAGLVAEID AARAQAREGD TR