Gene Bcav_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2231 
Symbol 
ID7861427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2509850 
End bp2511676 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content76% 
IMG OID643866323 
ProductABC transporter related 
Protein accessionYP_002882244 
Protein GI229820718 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCCCC ACGCTCTCAC CGGTGGGCCC GCGCGGCGGT CCTGGGACCT CGTCGTGCGC 
GGCCTGCGGG CCGAGCCCCG CGCGTTCGCC GTCGCGATCG GTGCATCCGC TCTGTACGGC
GTCGGCGTCG TGGCCTCCGG GTGGGCGCTC GGCCAGGTCA CCGACCGGGT CGTGGCGCCG
GCGCTCGGCG GAGACGGGGT GGAGCCGTCA GCCATCTGGT GGGCGGGCGC CGCCCTCGTG
CTCATCGGCG CCGTGACCGC CGTCGCCGTG GCGTTCCGGC GGGTGTTCGC CGGGATCGCC
GCGCTCGACG TCCAGGCCGG CCACCGGCGC GCGGTGACGC GCCAGTACCT GCGCCTCCCG
TTGTCCTGGC ACCGCCGCCA CCCCGCGGGG CAGCTCCTGT CCAACGCCAG CTCGGACGCC
GAGGCCGCCG GCATGGTGTT CGTGCCGCTG CCGTTCGCGC TCGGCGTCGT CGTGATGATC
GTCGTCGCGT GCGCCGCCAT GTTCGCCGCA GACCCGTTGC TCGGCCTCAT CGGGCTCACG
GTGCTGCCGC TCGTGCTCGT CGTGAACGCC GTGTACCGGC GGTGGATGTC CCCGGCGATC
ACCCACGCGC AGGAACAGCG GGCGCGGGTC GCCGACGCCG CCCACGAGAG CTTCGAGGCG
GCGCTCCTCG TGAAGTCGCT CGGCACCGCC GACCGCGAGG AAGAGACGTT CGCGCGGGTC
ACCGACCGGC TGCGTGCCGC GAACGTCGGG GTCGGGCGGA TCCGGTCCGT CTTCGACCCC
GTGATCGACT TCCTGCCGTC GGCGGCGACG CTCGCCGTCC TCGTCGTCGG TGCGTCGCAG
GTGGCGAGCG GTGCGGCAGG GCCGGGCGAC GTCGTCACGG CCGCGTACCT GCTCACGGTG
ATGACGTTCC CGGTCCGCGC GATCGGGTTC GTGCTCGGCG ACCTGCCGCG CTCGCTCGTG
GGGCACGACC GCATCTCCCG GGTCCTCGAC GCGCCCGGCG GTGACGAGCC GCCGAGCGGC
GCCGGCGGTG CGGCGCTCGA CGCCCCGCGC GCCGCCCTCG AGGTCCGCCT GGACGGTGTC
GCGGTACGCG TCCCCCCGCC GCCGGGCGGC GAGGACGACG TCCCGCTCCT CCACGACGTG
TCGCTCACCC TGCGAGCCGG CCGCACGCTC GCCGTCGTCG GCCGCACGGG CTCCGGGAAG
TCGACCCTCG TGGACGTCAT CGCTCAGCTG ACCCCCGCGG CCGCCGGCAC CGTCTCGTTC
GACGGGACTG ACGCGCGCGA CGTCCCCGCA CTGCAGCGCA CCCACGAGGT CGCGTACGTG
GCGCAGGAGG CGTTCGTCTT CGAGGACACG GTGCGCGGCA ACGTGCTGCT CGACGACGGC
GACCCCGACG GCGGCGACGA CGACCGGGTG TGGGAGGCGC TCCGGCTCGC CCGCGCGGAC
GAGATCGTGG ACGCGCTGCC CGACGGCCTC GACACGGTGA TCGGGGAGCG CGGCACGAGC
CTGTCGGGCG GCCAGCGGCA ACGGATCGCC ATCGCCCGCG CCCTCGTGCG CCGGCCCAGG
CTGCTGCTGC TGGACGACGC CACGTCGGCG CTCGACCCCG TCGTCGAACG CGAGATCCTG
GCGGGCCTGC GGTCCGCGGG CCGCGACGTG ACGGTCGTCG TCGTCGCCTA CCGACCGGCG
ACGATCGCCC TCGCCGACGA GGTGCTGCAC CTCGAGCGAG GCCGGGTCGT CGCCCACGGC
ACCGCAGCCG AGCTCCGAGC CACCGACCCG GGCTTCGTCG ACCTCGTGAC GGCGTACGAG
CGGCACCGCG CGGAGGTCGG CCGATGA
 
Protein sequence
MPPHALTGGP ARRSWDLVVR GLRAEPRAFA VAIGASALYG VGVVASGWAL GQVTDRVVAP 
ALGGDGVEPS AIWWAGAALV LIGAVTAVAV AFRRVFAGIA ALDVQAGHRR AVTRQYLRLP
LSWHRRHPAG QLLSNASSDA EAAGMVFVPL PFALGVVVMI VVACAAMFAA DPLLGLIGLT
VLPLVLVVNA VYRRWMSPAI THAQEQRARV ADAAHESFEA ALLVKSLGTA DREEETFARV
TDRLRAANVG VGRIRSVFDP VIDFLPSAAT LAVLVVGASQ VASGAAGPGD VVTAAYLLTV
MTFPVRAIGF VLGDLPRSLV GHDRISRVLD APGGDEPPSG AGGAALDAPR AALEVRLDGV
AVRVPPPPGG EDDVPLLHDV SLTLRAGRTL AVVGRTGSGK STLVDVIAQL TPAAAGTVSF
DGTDARDVPA LQRTHEVAYV AQEAFVFEDT VRGNVLLDDG DPDGGDDDRV WEALRLARAD
EIVDALPDGL DTVIGERGTS LSGGQRQRIA IARALVRRPR LLLLDDATSA LDPVVEREIL
AGLRSAGRDV TVVVVAYRPA TIALADEVLH LERGRVVAHG TAAELRATDP GFVDLVTAYE
RHRAEVGR