| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2038 |
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| Symbol | |
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| ID | 7858658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2317461 |
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| End bp | 2320790 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643866132 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_002882055 |
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| Protein GI | 229820529 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00373357 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCGCC GCACAGATCT GACGAGCGTG CTCGTCATCG GGTCGGGACC GATCGTCATC
GGGCAGGCCG CCGAGTTCGA CTACTCCGGC ACCCAGGCGT GCCGGGTGCT CCGCGAGGAG
GGCCTCCGGG TCATCCTCGT GAACTCGAAC CCGGCCACGA TCATGACGGA CCCCGAGTTC
GCCGACGCCA CGTACGTCGA GCCGATCACG CCGGAGGTCG TGGCGTCGAT CATCGCGAAG
GAGCGGCCCG ACGCGCTGCT CCCGACGCTC GGCGGGCAGA CCGCCCTCAA CACGGCCATC
GCGTTGCACG AGGCGGGCGT CCTGGCCGAG TACGACGTCG AGCTCATCGG TGCCAACATC
GAGGCCATCC ACCTCGCCGA GGACCGGGAC CAGTTCAAGG GCGTCGTCGA GCGGTGCGGG
GCCGAGTCGG CCCGCTCGCA CATCGCGCAC ACGATCGAGG AGGTGCTCGA GGCCGCCCGT
GACCTCGGGT ACCCGCTCGT CGTCCGGCCG TCCTTCACGA TGGGCGGCCT CGGGTCCGGC
ATCGCGTACG ACGAGGCCGA CCTGCGTCGC ATCGCCGGCG CCGGGCTCCA CTACTCACCG
ACCACCGAGG TGCTCCTCGA GGAGTCGATC CTCGGCTGGA AGGAGTACGA GCTGGAGCTC
ATGCGCGACC GGAACGACAA CGTCGTCGTC GTGTGCTCCA TCGAGAACGT CGACCCGGTC
GGCGTGCACA CGGGCGACTC GATCACCGTC GCCCCGGCGC TCACGCTCAC GGACCGCGAG
TACCAGCGGC TGCGCGACGT CGGCATCGCC GTCATCCGCG AGGTCGGCGT CGACACGGGC
GGCTGCAACA TCCAGTTCGC CGTGCACCCG GACACGGGTC GCGTCGTCGT CATCGAGATG
AACCCGCGCG TGTCGCGCTC CTCGGCGCTC GCGTCGAAGG CCACGGGCTT CCCGATCGCG
AAGATCGCGG CGCGGCTCGC CGTCGGGTAC ACGCTCGACG AGATCCCGAA CGACATCACG
GGCTCCACGC CCGCGTCGTT CGAGCCGACG CTCGACTACG TCGTCGTGAA GGTGCCGCGG
TTCGCGTTCG AGAAGTTCCC GGCCGCGGAC CCGCTGCTCA CGACGACGAT GAAGTCCGTC
GGCGAGGCCA TGGCTCTCGG GCGCAACTTC ACCGAGGCCC TGCAGAAGGC GATGCGCTCG
ATCGACAAGG CGGGCTCGAC GTTCCACTGG CGCGGCCAGG CACCTGACCC GGAGCGGACG
GCGGCGTTGG TGGACGCCGC GCGCACGCCC ACGGAGGGGC GCCTCGTCCA GGTGCAGCAG
GCGATCAGGG GCGGCGCGAC GCTCGAGGAG CTGTTCGAGG CCACGGCGAT CGACCCGTGG
TTCCTCGACC AGCTGTTCCT CCTCGAGGAG GTCGCGGGCC GGCTCGCTGC CGTCGACGCG
CTCGACGCCG GCGTGCTGGC CCTGGCGAAG CGGCACGGCT TCTCCGACGC GCAGGTCGCC
GAGATCCGCG ACCTGGGCGA GGCCACGGTC CGGGAGATCC GGCACGCGTA CGGCCTGCGC
CCGGTGTACA AGACCGTCGA CACGTGCGCC GCGGAGTTCG AGGCACGCAC GCCGTACCAC
TACTCGAGCT ACGACGCCGA GACGGAGGTG CAGCCGCGGG ACCGTCCCGC CGTCCTCATC
CTGGGCTCGG GACCGAACCG CATCGGGCAG GGCATCGAGT TCGACTACTC GTGCGTGCAC
GCCGCCCTCG CGCTCAAGGG CGAGTACGAG ACGGTCATGG TCAACTGCAA CCCCGAGACC
GTCTCCACCG ACTACGACAC GGCGGACCGG CTGTACTTCG AGCCGCTGAC GTTCGAGGAC
GTGCTCGAGG TCTACCACGC CGAGCTCGCG GTGGGCCCGG TGGCCGGCAT CATCGTCCAG
CTCGGCGGCC AGACCCCGCT GTCGCTCGCC ACGCGCCTCG CCGACGCCGG CCTGCCGATC
TGGGGCACGC CACCGGAGGC GATCGACGCC GCGGAGGACC GCGGGGTCTT CGGAGAGGTC
CTCGTCGCGG CGGGGCTGCC CGCGCCGGCG TTCGGCACCG CCACCTCGCT CGCGCAGGCA
CGCGCCGTCG CCGACCGCAT CGGCTACCCG GTCCTCGTGC GGCCGTCGTA CGTGCTCGGC
GGGCGTGGGA TGGAGATCGT CTACGACGTC GAGCAGCTCA CCGACTACGT CCGGCGCGCC
ACCCCGACGG ACGGGCCGGC GGACGCCCCG GTGTTCGCGT CGCCCGTGCT CATCGACCGG
TTCCTCGACG AGGCGATCGA GATCGACGTC GACGCGCTGT ACGACGGTCA CGAGCTGTTC
CTCGGCGGCG TCATGGAGCA CATCGAGGAA GCCGGGATCC ACTCCGGCGA CTCGGCGTGC
GTCCTCCCGC CGGTGACGCT CTCGCGCCGC GAGATCGAGC GCATCCGCAC GTCGACCGAG
GCCATCGCGC GCGGCGTCGG CGTCCGGGGC CTGCTCAACG TCCAGTTCGC GCTCTCGTCC
GACGTCCTCT ACGTCCTCGA GGCGAACCCG CGGGCGTCGC GCACCGTGCC GTTCGTCGCC
AAGGCCACGG GGGTGCCGCT CGCCAAGGCC GCGTCGCTGC TCATGGCGGG GGCGACGATC
GCCGACCTGC GCGCCTCGGG ACACCTCCCC GCCGTCGACG GGACGTACGC CCACCCGTCG
TCGCCGGTGG CCGTCAAGGA AGCGGTCCTG CCGTTCAAGC GGTTCCGCAC CCGCGCCGGG
ACGGTCGTGG ACACGGTCCT CGGCCCGGAG ATGCGGTCGA CGGGCGAGGT CATGGGGTAC
GACGTCGACG TGCCGGCCGC GTTCGCGAAG TCCCAGGCCG CCGCGTACGG CGGCCTGCCG
ACGTCCGGCC GCGTCTTCGT CTCGGTCGCG GACCGCGACA AGCGCTCGAT CGTGTTCCCG
GTCGCGCGGC TGGTCGAGCT CGGGTTCGAG ATCCTCGCGA CCACCGGCAC GGCCGACGTG
CTCCGCCGGT ACGGGATCGA CTCGCGCGTC GTGCGCAAGG CGTCCGACGG CAGGGGACCG
GACGGCGAGC TGACGGTCGT GGACCTCATC ACCGCCGGTG AGATCGACAT GGTGGTCAAC
ACGCCCAACG GGCAGGGGGC GCGCGCGGAC GGCTACGACA TCCGCACCGC CACGACGGCC
GCCGACAAGC CCATCGTCAC CACCACGCAG CAGTTCGCTG CGGCGGTGCT CGGCATCGAG
GCGATCCGGC GGGGACCCTT CGCCGTCGCC TCCCTCCAGG AGCACGACGC CGCCCGCGCG
GCCCGGGAGA CCGAAGGAGT CCACGCATGA
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| Protein sequence | MPRRTDLTSV LVIGSGPIVI GQAAEFDYSG TQACRVLREE GLRVILVNSN PATIMTDPEF
ADATYVEPIT PEVVASIIAK ERPDALLPTL GGQTALNTAI ALHEAGVLAE YDVELIGANI
EAIHLAEDRD QFKGVVERCG AESARSHIAH TIEEVLEAAR DLGYPLVVRP SFTMGGLGSG
IAYDEADLRR IAGAGLHYSP TTEVLLEESI LGWKEYELEL MRDRNDNVVV VCSIENVDPV
GVHTGDSITV APALTLTDRE YQRLRDVGIA VIREVGVDTG GCNIQFAVHP DTGRVVVIEM
NPRVSRSSAL ASKATGFPIA KIAARLAVGY TLDEIPNDIT GSTPASFEPT LDYVVVKVPR
FAFEKFPAAD PLLTTTMKSV GEAMALGRNF TEALQKAMRS IDKAGSTFHW RGQAPDPERT
AALVDAARTP TEGRLVQVQQ AIRGGATLEE LFEATAIDPW FLDQLFLLEE VAGRLAAVDA
LDAGVLALAK RHGFSDAQVA EIRDLGEATV REIRHAYGLR PVYKTVDTCA AEFEARTPYH
YSSYDAETEV QPRDRPAVLI LGSGPNRIGQ GIEFDYSCVH AALALKGEYE TVMVNCNPET
VSTDYDTADR LYFEPLTFED VLEVYHAELA VGPVAGIIVQ LGGQTPLSLA TRLADAGLPI
WGTPPEAIDA AEDRGVFGEV LVAAGLPAPA FGTATSLAQA RAVADRIGYP VLVRPSYVLG
GRGMEIVYDV EQLTDYVRRA TPTDGPADAP VFASPVLIDR FLDEAIEIDV DALYDGHELF
LGGVMEHIEE AGIHSGDSAC VLPPVTLSRR EIERIRTSTE AIARGVGVRG LLNVQFALSS
DVLYVLEANP RASRTVPFVA KATGVPLAKA ASLLMAGATI ADLRASGHLP AVDGTYAHPS
SPVAVKEAVL PFKRFRTRAG TVVDTVLGPE MRSTGEVMGY DVDVPAAFAK SQAAAYGGLP
TSGRVFVSVA DRDKRSIVFP VARLVELGFE ILATTGTADV LRRYGIDSRV VRKASDGRGP
DGELTVVDLI TAGEIDMVVN TPNGQGARAD GYDIRTATTA ADKPIVTTTQ QFAAAVLGIE
AIRRGPFAVA SLQEHDAARA ARETEGVHA
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