Gene Bcav_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1982 
Symbol 
ID7858602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2261882 
End bp2262868 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content75% 
IMG OID643866076 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_002881999 
Protein GI229820473 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.859869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00608029 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGGGGC CCGACCCGGC TCGGCTGTTC GCGTTCGCCT GGCGATCCGT CGGCCGTCTT 
CCGCAGCCGG TCGCCGTCGC GGTGTTCGAC GCCGTCGCTG ACGTCGCATG GCTCGGGCGC
CTCGCGGGAG CGCGTCAGCT CGAGGCCAAC CTCGCCCGGT TGCGGCCCGA CCTGTCCACC
CGTGAGCTGC GCCGGCTCAC GCGCGACGGG ATGCGGTCGT ACATGCGCTA CTACCGCGAG
GCGTTCCAGC TGCCGACGTT CACCCGGGAG CAGCTTGCCG CCCGCGTCCG CGCGACCGGC
GTGCCAGCGG TCCGCACGGA GCTCGAGTCC GGGCGCGCGG TCGTGCTCGC TCTCGCGCAC
GCGGGGAACT GGGACCTGGC GGGTGCGTGG GCGACGACGT TCCTCGGCCC CGTTCTCACC
GTCGCCGAGA AGCTCCCGGG CGGGCTCTTC GCCGAGTTCC TCGCGTTCCG GGAGAGCCTC
GGGATCGAGA TCGTCCCGCT GGAGAACCAC TCGACGTTTC GCACCCTGAC GCGCCGGGCG
CGCGCCAGGG CCGCGCTCGT GCCGCTCCTC GCCGACCGCG ACCTGAGCAC GCGGGGCATC
GAGGTCGACC TGGCCGGGCA GCGCGCGCGG GTCGCCGCCG GCCCGGCCGC GCTCGCCCTC
ACTGGCGACT ACGCCCTGGT GCCGGCCGTC ATCACGTACG AGCGCCTCAC GGGGGAGCGG
CGCCGCGCCG CCCGCAGCGC GTGGGGGATC GTCATCGAGT TCCGGCCGGC GATCGAGCGG
CCGGCCGGGC TGTCCCGGGC CGACGCGGTG GCGCCGATGA CGCAGGCATG GGTCGACGTC
GTCTTCACCC GGCTCCGCGA GCGACCGCAG GACTGGCACA TGCTGCAGAA GGTCTTCCTC
GCGGACCTCG ATCCCGAGCG TCTCGCGAAG GCCGCGGCGC GGGACGCCGT CGTCGGCCCG
GATGCGGCCG CCCAGGGGGA CTCGTGA
 
Protein sequence
MRGPDPARLF AFAWRSVGRL PQPVAVAVFD AVADVAWLGR LAGARQLEAN LARLRPDLST 
RELRRLTRDG MRSYMRYYRE AFQLPTFTRE QLAARVRATG VPAVRTELES GRAVVLALAH
AGNWDLAGAW ATTFLGPVLT VAEKLPGGLF AEFLAFRESL GIEIVPLENH STFRTLTRRA
RARAALVPLL ADRDLSTRGI EVDLAGQRAR VAAGPAALAL TGDYALVPAV ITYERLTGER
RRAARSAWGI VIEFRPAIER PAGLSRADAV APMTQAWVDV VFTRLRERPQ DWHMLQKVFL
ADLDPERLAK AAARDAVVGP DAAAQGDS