| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1963 |
|---|
| Symbol | |
|---|
| ID | 7858356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2239590 |
|---|
| End bp | 2240039 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866053 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002881980 |
|---|
| Protein GI | 229820454 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4430] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0905021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000327223 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTCC GAGCGGTCGT GGAGCTGGGT GGGAAGACGG CGACGGGCAT CCCGGTGCCG
GACGACGTCG TCGCGACGCT GGGTTCCGGC AAGCGGCCGG CGGTCACCGT CACGGTGGGC
GGGCACACCT ACCGCACGAC CGTCGCGCCG ATGGGAGGCC GGTACTTCGT GCCCCTGAGC
GCCGAGAACC GCGCCGCCGC GGGCGTCGCC GCCGGTGACG ACGTCGACGT CGAGATCGCC
CTCGACACGG CGCCGCGCGT CATCGAGGTC CCCGCGGACC TGGCCGCCGC GCTCGACGAC
GAACCCGAGG CCCGGCGCTT CTTCGACTCG CTCTCCTACA GCAACCAGCG GTTCCACACC
GAGTCCGTGA CGGGCGCGAA GCAGCCCGAG ACGCGGGCAC GGCGCGTCGC CAAGGTCGTC
GAGACGATGC GGGCCGGCCG CGCCCGCTGA
|
|---|
| Protein sequence | MRFRAVVELG GKTATGIPVP DDVVATLGSG KRPAVTVTVG GHTYRTTVAP MGGRYFVPLS
AENRAAAGVA AGDDVDVEIA LDTAPRVIEV PADLAAALDD EPEARRFFDS LSYSNQRFHT
ESVTGAKQPE TRARRVAKVV ETMRAGRAR
|
|---|
| |