| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1923 |
|---|
| Symbol | |
|---|
| ID | 7858316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2190670 |
|---|
| End bp | 2191260 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866014 |
|---|
| Product | ribosomal RNA adenine methylase transferase |
|---|
| Protein accession | YP_002881941 |
|---|
| Protein GI | 229820415 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.869968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0208059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGGGG GACACGGACG CTCCCGATGG AGCTACTTCA GACTCTCGCC TGACTGGGCG
TCCACGCTCG TCGACCGGGC GGGCGTGGAG CACGGGGACA CCGTGCTCGA CCTGGGCGCC
GGCGCCGGGG CGCTGACCGG CCCGCTCGTC GATCGCGGCG CACGAGTCAT CGCGCTCGAA
CGGCACGCGG GACGCGTGCA ACGGCTGCGC GAGCGCTTCG ACGGACGGTC CGTGTCCGTC
GTCGAGGCCG ACATCCGCGA CCTGCGGCTT CCGGCGCGAC CGTTCCGGGT CGTGGCCAAC
CCGCCCTTCC ACCTCGCGCG TCCGATCGTC GCCGACCTGC TGGGCGCGCG CCTGCTCGTG
CGCGCCGACC TCGTGCTGCG CCACGACACG GCCCGCAACC TGGCCCGGGC GCACGCGGAC
GACCCGCGCT GGGTGGTGGA GACGACGCTC GCGATCCCGC GGACGGCGTT CGAGCCCTCG
CCCAGCGTCG ACGCGCTGGT GCTCACGCTC AGGCGTCGAT CCGGTCCCGG TCGAGCTCCG
CGGCGCCGGC GACGAGGAAG TCCTTCCGCG GGGCGACGTC GTTCCCCATG A
|
|---|
| Protein sequence | MSGGHGRSRW SYFRLSPDWA STLVDRAGVE HGDTVLDLGA GAGALTGPLV DRGARVIALE
RHAGRVQRLR ERFDGRSVSV VEADIRDLRL PARPFRVVAN PPFHLARPIV ADLLGARLLV
RADLVLRHDT ARNLARAHAD DPRWVVETTL AIPRTAFEPS PSVDALVLTL RRRSGPGRAP
RRRRRGSPSA GRRRSP
|
|---|
| |