Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1857 |
Symbol | |
ID | 7860479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2119330 |
End bp | 2120058 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865948 |
Product | integral membrane protein |
Protein accession | YP_002881875 |
Protein GI | 229820349 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGCA GCTCCTCGAA ACCCGACTCC TCGGCGCCGA CGAAGGCCCC CAAGGAGAAG AAGCGTCGCT GGTACCACCA GGTGTGGGAG GTCTACCAGA TGACGCGGAA GGCTCAGCCT TCCATCACCT GGTGGATCCT CCTCATCATC GTGGGCGGCT CGGCCGCCGG CTACGGGCTC GGCCTGCTCT GGGGGCAGCC GATCTACACG CTGGTGCTCG CGATCCCGTT CTCCGTGCTG GGTGCGATGT TCCTGCTGGC GCGACGCGCG GAGACGGCGG CGTACGCACG GATCGAGGGC GAGCCGGGCG CCGTCTCCGC GGCCCTCGGC ACCATCCGTC GCGGCTGGAA CATCGAGGAG CAACCTGTCG CCGTCGACCC GCGCACCCAG GACATGGTGT TCCGGGCGAT CGGCAAGCCG GGTGTGGTGC TCATCAGCGA GGGCCCGTCC GGGCGCGCCG GACGCCTGCT GGAGACGGAG AAGCGGCGCG TTCAGCGCCT GGTCCCGTCG GTGCCCGTGC ACCTCGTCCA GTGCGGCCGG GGCGACGGTC AGGTCCCGCT CCCGAAGCTC GCGTCGACGG TACAGAAGCA GAAGGGCAAG CTGTCCAAGG CGGAGGTCGC CGAGGTCTCC AAGCGGCTGC GTGCCATGGG GACGGCGCGG CTGCCGATCC CGAAGGGCGT CGACCCCACG CGGATGCGCC CCGACCGCAA GGGCATGCGG GGCCGCTGA
|
Protein sequence | MARSSSKPDS SAPTKAPKEK KRRWYHQVWE VYQMTRKAQP SITWWILLII VGGSAAGYGL GLLWGQPIYT LVLAIPFSVL GAMFLLARRA ETAAYARIEG EPGAVSAALG TIRRGWNIEE QPVAVDPRTQ DMVFRAIGKP GVVLISEGPS GRAGRLLETE KRRVQRLVPS VPVHLVQCGR GDGQVPLPKL ASTVQKQKGK LSKAEVAEVS KRLRAMGTAR LPIPKGVDPT RMRPDRKGMR GR
|
| |