Gene Bcav_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1829 
Symbol 
ID7860451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2090266 
End bp2091006 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content75% 
IMG OID643865920 
Producthypothetical protein 
Protein accessionYP_002881847 
Protein GI229820321 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.14591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0297669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG CCCCCGCCGC CGACCAGCGG CGACTGCTGG ACGTCCAGGC GCTCGACACG 
CGCCTGGCCC AGCTGGCCCA CCAGCGGCGC GCCCTGCCGG CGATCGCCGC CATCGCCGAG
CTCGAGGGCC GGCTCGAGGA CCTCGGCCGC GTCGAGGTCG ACGTGCGGAC CCGGATCTCC
GACCTGCGGC TGGAGGTCGC GAAGGCGGAG ACCGACGTCG AGCAGGTGCG CTCACGTGCC
CAGCGCGACC AGGCGCGGCT CGATTCGGGA GCCGTGTCCG CGAAGGACGC GCAGGCGCTC
ACGAGCGAGC TCGAGTCGCT CGCCCGCCGG CAGAGCGACC TCGAGGACGT CGAGATCGAG
GTCATGGAGC GCCTCGAAGG GGCCGAGGGC GAGCTCGCCG CGGTCGGGGA GCAATCCGAG
GCGCTGCGGG CCGACGTCGC CCGCCTCGAG GCGGACCGGG ACGCCGCGTT CGCGGACATC
GACGCCCAGG CAGCCCAGGT CACGAGCCAG CGCGACGTCG CCTCCGACGG GATCGACGCC
GGCCTCCTCG CCCTGTACGA GAAGGTCCGC GCGCAGACCG GCGGGCTCGC CGCGCTCGCC
CTGCGCGGCC AGCGGACCGA GCCGCTCGCG ATCGACCTCA GCCTCACCGA GCTCGCCGAG
ATCAAGGCCG CGGCGCCTGA CGCCGTCGTC CGCTCGGAGG AGTACGGGTA CCTGCTCGTC
CGGCTCGCTC CGGGGGACTG A
 
Protein sequence
MTTAPAADQR RLLDVQALDT RLAQLAHQRR ALPAIAAIAE LEGRLEDLGR VEVDVRTRIS 
DLRLEVAKAE TDVEQVRSRA QRDQARLDSG AVSAKDAQAL TSELESLARR QSDLEDVEIE
VMERLEGAEG ELAAVGEQSE ALRADVARLE ADRDAAFADI DAQAAQVTSQ RDVASDGIDA
GLLALYEKVR AQTGGLAALA LRGQRTEPLA IDLSLTELAE IKAAAPDAVV RSEEYGYLLV
RLAPGD