Gene Bcav_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1804 
Symbol 
ID7861314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2066220 
End bp2067455 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content74% 
IMG OID643865894 
ProductBeta-ketoacyl synthase 
Protein accessionYP_002881822 
Protein GI229820296 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0502137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0202251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CACCCACAGT CGTCGTGACC GGCGTCGGCG CGACCACGCC TCTCGGCGGA 
GACGTCCCGT CCACGTGGCG GGCTGCCCTG GCCGGCACGT CGGGCGCCCG GACCCTGCCG
TACGACTGGG TCACCCAGTA CGAGCTGCCG GTCACGTTCG GCGCGCCGCT GGCGGTTCCG
GCCGCGGACG TCCTGCCGGT GCCGCAGCAG CGCCGCATGG ACCCGAGCGC CCAGTTCGCG
ATGATCGCGG CGCGCGAGGC GTGGGCTGAC GCCGGCACAC CCGAGGTCGA CGGCGAACGG
CTCGGCGCCG TCGTCGCGTC CGGGATCGGC GGCGTCTGGA CCCTGCTGTC CGCCTGGGAC
ACGGTGAAGG AGCGCGGCGC CCGGCGCGTG CTGCCCCTGA CCGTCCCGAT GCTCATGCCC
AACTCCCCCG CCGCGTACGT CTCCATCGAG CTCGGCGCCA AGGCGGGCTC GCACACGCCG
GTGTCGGCGT GCGCCTCGGG TGCCGAGGCG ATCGGTTACG GCGTCGAGAT GATCCGCACG
GGCCGCGCCG ACGTCGTCGT CGCCGGCGGC ACGGAGGCGG CCATCCACGC GCTGCCGATG
GCGGCGTTCG CGAAGATGCA GGCCCTGTCG ACGCGGAACG ACGACCCAGC CGCGGCGTCG
CGACCCTATG ACGCGGATCG GGACGGTTTC GTGCTCGGCG AAGGGGCCGG CCTCGTCGTC
CTCGAGAGCG AGGAGCACGC CCGCGCCCGC GGCGCACGGG TCTACGCCCG GCTCGCCGGC
GTCGGCATGA CGTCGGACGC GTACGACATC GCGCCGCCGG ACCCGTCGGG TGCCGGTCAG
GAGCGCGCGA TGCGCCTGGC GCTCCAGGAC GCCGGGCTCT CGCCGGCCGA CATCGCCCAC
GTCAACGCGC ACGCGACGTC GACCCCGGCC GGCGACGGCG TCGAGGCGGC TGCGATCCAC
CGCACGCTCG GGGACGGCGT CGTCGTGTCC GGGACGAAGT CGATGACGGG CCACCTGCTC
GGCGGCGCCG GCGCGCTGGA GACGATCTTC ACGATCCTCG CCGTGCAGAA CCGCACGGCT
CCCCCCACGA TCAACGTCGA CCGGCTCGAC GACGGCATCG AGATCGACGT CGCCACGTCG
GCGCGGGAGC TGCGCGCGAC GGGTGACCTC GCCGCGATCA ACAACGCGTT CGGCTTCGGC
GGGCACAACG TCGCGCTGGT CGCCACGAGC GCCTGA
 
Protein sequence
MSTPPTVVVT GVGATTPLGG DVPSTWRAAL AGTSGARTLP YDWVTQYELP VTFGAPLAVP 
AADVLPVPQQ RRMDPSAQFA MIAAREAWAD AGTPEVDGER LGAVVASGIG GVWTLLSAWD
TVKERGARRV LPLTVPMLMP NSPAAYVSIE LGAKAGSHTP VSACASGAEA IGYGVEMIRT
GRADVVVAGG TEAAIHALPM AAFAKMQALS TRNDDPAAAS RPYDADRDGF VLGEGAGLVV
LESEEHARAR GARVYARLAG VGMTSDAYDI APPDPSGAGQ ERAMRLALQD AGLSPADIAH
VNAHATSTPA GDGVEAAAIH RTLGDGVVVS GTKSMTGHLL GGAGALETIF TILAVQNRTA
PPTINVDRLD DGIEIDVATS ARELRATGDL AAINNAFGFG GHNVALVATS A