Gene Bcav_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1737 
Symbol 
ID7861245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1986490 
End bp1987362 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content78% 
IMG OID643865825 
Productcompetence protein ComEA helix-hairpin-helix repeat protein 
Protein accessionYP_002881755 
Protein GI229820229 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGGC ACCGGCAGCG CGCGCAGAAC CGGGCGCGGC TCGCCGCGCT CACGCGCGCC 
GCCTACTCGG CGGGGGAGGG CGTGCTGCCG GTCGACGCGG CCGAGCACGA CCACCTCGCC
GGTGCTGCGG CGCCGGACGA GCTCGCGCCG GAGGAGATCG AGCTGGATCG GGGTGCTGTC
GACCGTCGGC GGCGGCGCGC CCGGGCGCGG TGGCGGGTGG GGGTCGCCCC GCGGGCAGCG
CTCGGCCTGG TGCTCGCCGT CGCCGTGGTC GTCGTCGTCC TCGCCGTGCG TTCGCTGGCG
GCCGACGGCG GTACGCCGAT CCCCGACCCG GCGCCTGGTT CCGCCTCGTC CGCTGGTTCC
GAAGATCGCA CCGCGGACGC GTCCCCCGGT GAGACCGCTG GACCGAGCCC CGCCGTGCCG
TCGCCCACCG GCGAGGTGGT CGTGCACGTC GCCGGCCTCG TCGCGAGTCC GGGAGTCGTC
TCGCTGCCGC CGTCCTCGCG CGTGCAGGAC GCCCTCGAGG CCGCCGGCGG TGCCCTCCCG
GAGGCCGACC TCGCGGCGCT CAACCTGGCG CGGGTCCTCG TCGACGGCGA GCAGGTGTAC
GTCCCGGCGC CGGGGGAGGC CCCGCCGGCC GGAGCGGGCG GCGCGCCGGG TGCTCCCGCG
GCGGAGGGCG GGTCCGACGG GGGCCCGGTG AACCTCAACA CCGCCGATCT CGCCGCGCTC
GACACGCTCC CCGGGATCGG CCCCGCACTC GCGCAGCGCA TCGTCGAGTG GCGGACGGCC
AACGGCTCCT TCGTGGACGT CGAGGAGCTC ACCGAGGTGT CGGGCATCGG CCCGGCCACC
CTCGAACGCC TGCGACCGCT GGTCACCGTG TGA
 
Protein sequence
MDRHRQRAQN RARLAALTRA AYSAGEGVLP VDAAEHDHLA GAAAPDELAP EEIELDRGAV 
DRRRRRARAR WRVGVAPRAA LGLVLAVAVV VVVLAVRSLA ADGGTPIPDP APGSASSAGS
EDRTADASPG ETAGPSPAVP SPTGEVVVHV AGLVASPGVV SLPPSSRVQD ALEAAGGALP
EADLAALNLA RVLVDGEQVY VPAPGEAPPA GAGGAPGAPA AEGGSDGGPV NLNTADLAAL
DTLPGIGPAL AQRIVEWRTA NGSFVDVEEL TEVSGIGPAT LERLRPLVTV